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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Kalax.0241s0002.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family |
Trihelix |
Protein Properties |
Length: 291aa MW: 32436.7 Da PI: 6.9443 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Kalax.0241s0002.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 38.4 | 3.2e-12 | 18 | 108 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85
+Wt++ +L+ea ++ +l+rg+l+ ++W++v++ + + ++ r+ +qCk++++ ++k+yk +k++ + s++p++++l
Kalax.0241s0002.1.p 18 CWTEEASSTLVEAWARRFLDLNRGNLRLKDWQHVADLVnarhgHTKKTYRTDVQCKNRIDTIKKKYKVEKARVSASPGMLGSSWPFYERL 107
7*************************************988777778889*********************999986666779******9 PP
trihelix 86 e 86
+
Kalax.0241s0002.1.p 108 D 108
8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 291 aa
Download sequence Send
to blast |
MSDSATPSSR SVPVCEDCWT EEASSTLVEA WARRFLDLNR GNLRLKDWQH VADLVNARHG 60 HTKKTYRTDV QCKNRIDTIK KKYKVEKARV SASPGMLGSS WPFYERLDEL IGSSLKKPPA 120 PPPAATVTVS DSLSHSPPMA LPLPFPYRKS APLATAVLPK KRASPMDDSY FRRNYSAVAA 180 AAAAAATADD DEDDEEVGEE DGDDDLVQGF RGDEESEDGI RKLARAIRKF GDVYEKVEAE 240 KQTQMIEMEK QRMQLAKDLE VQRMQMFVNM QLQLKKIKIA KGNKSNGESI *
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT3G58630.1 | 3e-60 | sequence-specific DNA binding transcription factors |