PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Regulation |

Basic Information? help Back to Top

TF ID

Kalax.0174s0023.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Dof

Protein Properties

Length: 364aa MW: 38872.8 Da PI: 8.5638

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0174s0023.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124	5e-39	64	122	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 e++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk+s Kalax.0174s0023.1.p 64 EQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKTS 122 6889****************************************************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	7.0E-26	64	120	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	7.1E-33	65	121	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.506	67	121	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	69	105	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence Send to blast
MLQELLLGGG SSSTTTSPAY SGGEVKALIS NNINGGIIAE VTTTKNPSHD NSNNGSNNNN 60 SNLEQNLRCP RCDSSNTKFC YYNNYNLTQP RHFCKTCRRY WTKGGALRNV PIGGGCRKNK 120 TSFTSALPSV SKSTITGKPK AYSSSADLLL KSGLGNYGLQ DPQDQSSLHH PHHHPLLWSS 180 SPHQPQASHL LAFLRSTQNL NPSDHSHFMS SSPHQSIDQS GFTALNLLNS QTPLSGLDYP 240 SIGVCNSMLR NNNQPSTHHQ QLGGVDPNSR MHELYQRLKL STTGNTNSYS GGGGIEDSHA 300 HVLLGNRVVS ASSSPTSTSN NALDSVPVTM GGGSDLGLWN IPAAYSTWTN DHLPATTNGA 360 CPF*

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence Send to blast

MLQELLLGGG SSSTTTSPAY SGGEVKALIS NNINGGIIAE VTTTKNPSHD NSNNGSNNNN  60
SNLEQNLRCP RCDSSNTKFC YYNNYNLTQP RHFCKTCRRY WTKGGALRNV PIGGGCRKNK  120
TSFTSALPSV SKSTITGKPK AYSSSADLLL KSGLGNYGLQ DPQDQSSLHH PHHHPLLWSS  180
SPHQPQASHL LAFLRSTQNL NPSDHSHFMS SSPHQSIDQS GFTALNLLNS QTPLSGLDYP  240
SIGVCNSMLR NNNQPSTHHQ QLGGVDPNSR MHELYQRLKL STTGNTNSYS GGGGIEDSHA  300
HVLLGNRVVS ASSSPTSTSN NALDSVPVTM GGGSDLGLWN IPAAYSTWTN DHLPATTNGA  360
CPF*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1R3K4S2	2e-60	A0A1R3K4S2_9ROSI; Zinc finger, Dof-type

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	1e-34	TARGET OF MONOPTEROS 6

Link Out ? help Back to Top
Phytozome	Kalax.0174s0023.1.p