PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0158s0076.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NAC
Protein Properties Length: 509aa    MW: 56263 Da    PI: 5.8764
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0158s0076.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM151.93e-4741302127
                  NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                          p+G+rFhPtd+elv++yL+ k +g++ ++ + i+evd++k+ePw++p + + +++++ewyfF +rd+ky +++r+nratk+g+Wk tg+d
  Kalax.0158s0076.1.p   4 PVGYRFHPTDQELVNHYLRLKNQGSERDV-SNIREVDVCKWEPWEIPgHlCSDSDDQEWYFFGRRDSKYGKSTRSNRATKDGFWKPTGRD 92 
                          89************************999.77***************6346677899********************************* PP

                  NAM  90 kevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                          + +++++++l+g+kktLvfykgra+++++t+Wvmhey 
  Kalax.0158s0076.1.p  93 RFIKTSSKKLIGTKKTLVFYKGRAQRAHRTRWVMHEYL 130
                          *************************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.05E-482143IPR003441NAC domain
PROSITE profilePS5100546.8013149IPR003441NAC domain
PfamPF023652.6E-254129IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 509 aa     Download sequence    Send to blast
MSKPVGYRFH PTDQELVNHY LRLKNQGSER DVSNIREVDV CKWEPWEIPG HLCSDSDDQE  60
WYFFGRRDSK YGKSTRSNRA TKDGFWKPTG RDRFIKTSSK KLIGTKKTLV FYKGRAQRAH  120
RTRWVMHEYL ASADKHNPQA FVLYLLKKKE DENPEISNSD DKSSPSVSLL INNNAPSYSP  180
STPTLLRSSG NFSSSDQTRV NQNWKEQEVS SHAQNVHSPC LEDDIDFQPF ERFFDGQPPT  240
WDGLDRMLPA IPLSGVYPNQ GPTHMTARYI NVSSNDHGVT QFSNSKSRQE AVHNIDDAIS  300
SVFTLNTLIL DAESGTETDN DVPQSLFDEE AVYGGSAYLS DSESSNAEFY NDMILAHEVS  360
LSTNNSGHFE LQADGSIKRI ASGRIHGSAN NPRTGTNSEV PAQASSKKEG SYVPPKKLES  420
KIVEAVSDDD SSEGPAKSSA ILEVSGNESG GAVGSLGREG RGTGFMHYAE NPRVNNGTTP  480
PSNYILNLIM GIFLTGVIMG EVLFGLVT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-31112913138Stress-induced transcription factor NAC1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.28e-50NAC 014