 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Kalax.0149s0068.1.p |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
Family |
Trihelix |
Protein Properties |
Length: 295aa MW: 33027.1 Da PI: 7.4984 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Kalax.0149s0068.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 46.8 | 7.6e-15 | 18 | 108 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85
+Wt++ +Liea ++ +l+rg+l++++W++v++ + + ++ +r+ +qCk++++ ++k+yk +k++ + + s++p++d+l
Kalax.0149s0068.1.p 18 CWTEEASSTLIEAWGRRYLDLNRGNLRQKDWQQVADIVnarhgQTKKTHRTDVQCKNRIDTIKKKYKVEKARVSASAGMLASSWPFYDRL 107
7**************************************999999999***********************999998888889******9 PP
trihelix 86 e 86
+
Kalax.0149s0068.1.p 108 D 108
8 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 295 aa
Download sequence Send
to blast |
MTDSAAPSSR PVPVREDCWT EEASSTLIEA WGRRYLDLNR GNLRQKDWQQ VADIVNARHG 60 QTKKTHRTDV QCKNRIDTIK KKYKVEKARV SASAGMLASS WPFYDRLDEL IGSNSKRPAA 120 GGAGSAVSVS VSESLSHSPP MALPLPYPYR KSAPLATAVL PKKRASPMDD SYFRRNYSAV 180 AAAAAAAATA DDEEDEDEDD EDVREEEENF VQGFRGYEDS EDGIRKLARA IRKFGDVYEK 240 VEAEKQNQMI EMEKQRMQLA KDLEVQRMQM FVNMQLQLKK IKIAKGNKSN GEST*
|
Best hit in Arabidopsis thaliana ? help
Back to Top |
Hit ID |
E-value |
Description |
AT3G58630.1 | 5e-61 | sequence-specific DNA binding transcription factors |