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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Kalax.0149s0055.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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| Family |
NAC |
| Protein Properties |
Length: 363aa MW: 41942.5 Da PI: 6.5532 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kalax.0149s0055.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 169.9 | 8.4e-53 | 8 | 137 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeek.ewyfFskrdkkyatgkrknratksgyWkatg 87
+ppGfrFhPtdeelv++yL+k+v++ +++l +vik+vd+y++ePwdL++ ++ ++++ ++yfFs++dkky+tg+r+nratk+g+Wkatg
Kalax.0149s0055.1.p 8 VPPGFRFHPTDEELVDYYLRKRVASIQIDL-DVIKDVDLYRIEPWDLQElcNIGSDDQsDYYFFSHKDKKYPTGTRTNRATKAGFWKATG 96
69****************************.9***************95445555444488***************************** PP
NAM 88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
+dk++++ k++lvg++ktLvfykgrap+g+k dW+mheyrle
Kalax.0149s0055.1.p 97 RDKAIYA-KHSLVGMRKTLVFYKGRAPNGQKLDWIMHEYRLE 137
*******.8899****************************85 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 363 aa
Download sequence Send
to blast |
MNSFSHVVPP GFRFHPTDEE LVDYYLRKRV ASIQIDLDVI KDVDLYRIEP WDLQELCNIG 60
SDDQSDYYFF SHKDKKYPTG TRTNRATKAG FWKATGRDKA IYAKHSLVGM RKTLVFYKGR 120
APNGQKLDWI MHEYRLETNE NAAHQEEGWV VCRVFKKRMM TTSMRKDGDH HHESPYWYDE 180
QASFMGDMDS PMRMLSSHPY PSHNHLYHPP SYSCKQEQQL DLHNYTLSQD SFLNLPQLES 240
PKIPTPASAN ITSYGFGDQG VQHSYQNNVM YGDNSNSFAN EHHQAVDQVS TDWRVLDKFV 300
ASQLSHENGV EKHYYLNNGS TFEMDQDDMS GLIDNNGSKR VKMRIEFASS STSSGQVDQW 360
KS*
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription activator that binds to the secondary wall NAC binding element (SNBE), 5'-(T/A)NN(C/T)(T/C/G)TNNNNNNNA(A/C)GN(A/C/T)(A/T)-3', in the promoter of target genes (By similarity). Involved in xylem formation by promoting the expression of secondary wall-associated transcription factors and of genes involved in secondary wall biosynthesis and programmed cell death, genes driven by the secondary wall NAC binding element (SNBE). Triggers thickening of secondary walls (PubMed:16103214, PubMed:25148240). {ECO:0000250|UniProtKB:Q9LVA1, ECO:0000269|PubMed:16103214, ECO:0000269|PubMed:25148240}. |
