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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Kalax.0136s0108.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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| Family |
LBD |
| Protein Properties |
Length: 240aa MW: 25775.2 Da PI: 10.0554 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kalax.0136s0108.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 70.8 | 2.9e-22 | 59 | 132 | 28 | 100 |
DUF260 28 kkfanv.hklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100
+ f+n+ +++FGasnv+kll ++pe r da+++lvyeA++r+rdPvyG++g i +lqqql +l+a+l+++++e
Kalax.0136s0108.1.p 59 QLFKNLgRRVFGASNVSKLLLEAPEGLRADAANTLVYEANVRIRDPVYGCMGAIAALQQQLLSLQAQLDAVRAE 132
566665379************************************************************99987 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 240 aa
Download sequence Send
to blast |
MPLCDYYYSR SQNAAFASKV DIHTCASSWQ MVIDNELLQV SLQLIIRRAS RLSQKTSLQL 60
FKNLGRRVFG ASNVSKLLLE APEGLRADAA NTLVYEANVR IRDPVYGCMG AIAALQQQLL 120
SLQAQLDAVR AEILKHDVKI SQAPAASSAP SISSKNSTIA LAAIPNNNIS IQTSTTHHHQ 180
AVAMPMPPPP SPSEHPRRPR TPPLHSASAQ SGSSNSSALS TSSTTVTTSS LYSTQQRDK*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5ly0_A | 7e-21 | 59 | 136 | 38 | 114 | LOB family transfactor Ramosa2.1 |
| 5ly0_B | 7e-21 | 59 | 136 | 38 | 114 | LOB family transfactor Ramosa2.1 |
