PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

3D Structure |

Gene Ontology |

Regulation |

Basic Information? help Back to Top

TF ID

Kalax.0104s0067.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

G2-like

Protein Properties

Length: 387aa MW: 42761 Da PI: 7.2656

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0104s0067.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	98.9	3.6e-31	104	157	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrW+p+LH +Fv av++LGG+e+AtPk +l+lm+vkgL+++hvkSHLQ+YR+ Kalax.0104s0067.1.p 104 PRLRWSPDLHMCFVLAVQRLGGQERATPKLVLQLMNVKGLSIAHVKSHLQMYRS 157 8****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	8.7E-30	100	158	IPR009057	Homeodomain-like
PROSITE profile	PS51294	9.904	100	160	IPR017930	Myb domain
SuperFamily	SSF46689	1.36E-13	102	158	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.5E-22	104	159	IPR006447	Myb domain, plants
Pfam	PF00249	1.5E-7	105	156	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence Send to blast
MASSTEKPTE AAIEIISGDE SYTSSSSRGA KDHSTTYKSS PTVLDLNERA TGGVQEEDDN 60 GDYCDDDDNE EGNSTSGNNE DRGGREIRSN GMNTVRQYVR SKMPRLRWSP DLHMCFVLAV 120 QRLGGQERAT PKLVLQLMNV KGLSIAHVKS HLQMYRSKKL DESGQVLSHH QNAPYSHGKH 180 HHQMMEIMCR RGVHTSSHPY AHPHFKMDSS RSGTCSLNNH VEFPSFRQSL SSTRNKNWPV 240 GSHGRWSEDL GLAPGCAPDH EPRASDVSKH FAGPVRQSHF LEKRWTASGL GLNAAYDWDK 300 KHPSDDHQMM KLNSVLSLWN PQTSSTTWSP TTSPTLTTAC LRFKEAVSDS SSPTPNLQLS 360 LGHADENETK PSDDASQRHA KGSSSS*

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence Send to blast

MASSTEKPTE AAIEIISGDE SYTSSSSRGA KDHSTTYKSS PTVLDLNERA TGGVQEEDDN  60
GDYCDDDDNE EGNSTSGNNE DRGGREIRSN GMNTVRQYVR SKMPRLRWSP DLHMCFVLAV  120
QRLGGQERAT PKLVLQLMNV KGLSIAHVKS HLQMYRSKKL DESGQVLSHH QNAPYSHGKH  180
HHQMMEIMCR RGVHTSSHPY AHPHFKMDSS RSGTCSLNNH VEFPSFRQSL SSTRNKNWPV  240
GSHGRWSEDL GLAPGCAPDH EPRASDVSKH FAGPVRQSHF LEKRWTASGL GLNAAYDWDK  300
KHPSDDHQMM KLNSVLSLWN PQTSSTTWSP TTSPTLTTAC LRFKEAVSDS SSPTPNLQLS  360
LGHADENETK PSDDASQRHA KGSSSS*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	1e-16	105	159	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	1e-16	105	159	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	8e-17	105	159	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	8e-17	105	159	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	8e-17	105	159	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	8e-17	105	159	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	1e-16	105	159	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	1e-16	105	159	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	1e-16	105	159	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	1e-16	105	159	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	1e-16	105	159	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	1e-16	105	159	4	58	Protein PHOSPHATE STARVATION RESPONSE 1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	1e-36	G2-like family protein

Link Out ? help Back to Top
Phytozome	Kalax.0104s0067.1.p