PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0100s0066.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GeBP
Protein Properties Length: 423aa    MW: 46569.4 Da    PI: 6.7473
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0100s0066.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573117.29.3e-37190285297
               DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifel 91 
                          lfqrl+se+Dei++L+G++++ ak+g +p+dd+++f++fvk+si+++v+  ql++Ki+rLKkK++++ +++k+g +++fsk+h+q +++l
  Kalax.0100s0066.1.p 190 LFQRLFSEDDEIAVLKGMLEYSAKKGIDPMDDLNDFHDFVKGSIHVDVTGAQLIDKIKRLKKKYENNARRSKTGVDKTFSKPHEQISYDL 279
                          79**************************************************************************************** PP

               DUF573  92 skkiWg 97 
                          skkiWg
  Kalax.0100s0066.1.p 280 SKKIWG 285
                          *****8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.6E-32191285IPR007592Protein of unknown function DUF573
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005730Cellular Componentnucleolus
GO:0005829Cellular Componentcytosol
GO:0009507Cellular Componentchloroplast
GO:0016592Cellular Componentmediator complex
Sequence ? help Back to Top
Protein Sequence    Length: 423 aa     Download sequence    Send to blast
MAPKKPTPFE HPPRADASSD EEEEEEVSGG SEEEEEPPLS QPKITKKSTL PPVAEKNSTL  60
SKKPELKPEE SSSDEDGSDS ASDSGSDSEV TPPAPDPSVK PISSKPAEDS LKVLAKRKLK  120
KPDAPPAVAS AVSVTKSAGK RPAEGKGDGK NPKKSKKVAD VEDRQVTEEA KKPAADEEVK  180
KVGEDSKKQL FQRLFSEDDE IAVLKGMLEY SAKKGIDPMD DLNDFHDFVK GSIHVDVTGA  240
QLIDKIKRLK KKYENNARRS KTGVDKTFSK PHEQISYDLS KKIWGFENAT SASNGGFELN  300
ANGKGKRTPK PNMTPDQKEK HASTLQIPKD IRVRNKQEHA PLDCSSSLFL AELMKSKDAV  360
RMGLSEELLK RGLELLDDEM KARLEERWKN LLVAESELHY QRLGLIRDQV KLSLDAYKNS  420
GH*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25210.16e-36DNA-binding storekeeper protein-related transcriptional regulator