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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Kalax.0092s0036.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
| Family |
Dof |
| Protein Properties |
Length: 281aa MW: 30268.1 Da PI: 9.1859 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kalax.0092s0036.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 121.8 | 2.4e-38 | 14 | 72 | 3 | 61 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
+++l+cprCdstntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rk++++
Kalax.0092s0036.1.p 14 QTSLSCPRCDSTNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKSHSK 72
56789**************************************************9865 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 281 aa
Download sequence Send
to blast |
MGYVMDQRKQ EHRQTSLSCP RCDSTNTKFC YYNNYSLSQP RHFCKACKRY WTRGGTLRNV 60
PVGGGCRKSH SKRVRKPSSS SLPHHPPPSS ASSSHLADHA LALPSPSVAG ASNTLAPLFY 120
GTVDLSGGGR YEDLMRGSGY SDMNDISNSN DGFLSGYNRP LLAPPLGSGS ALALAGGGRG 180
SSSQQGHQLL QRVFPFQPSG ESASGGQLLI DPQAQTWNTD SHHVDQHRHQ HQHQQQPRSD 240
DRGHDSSSAY WAGGGGRSDN LASWPPDQLA SLDGSSNIQR *
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP003815 | 2e-34 | AP003815.2 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OJ1163_G04. |
| GenBank | AP014963 | 2e-34 | AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012615 | 2e-34 | CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence. |
