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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Kalax.0085s0072.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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| Family |
NAC |
| Protein Properties |
Length: 357aa MW: 39688 Da PI: 5.6977 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kalax.0085s0072.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 179.8 | 6.8e-56 | 18 | 144 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90
lppGfrFhPtdeel+++yL++k+ + ++ + +i e+d++k+ePwdLp+k+k +e+ewyfF+ rdkky+tg r+nrat++gyWkatgkdk
Kalax.0085s0072.1.p 18 LPPGFRFHPTDEELITHYLRHKIVDASFVA-VAIGEADLNKCEPWDLPAKAKMGENEWYFFCLRDKKYPTGLRTNRATEAGYWKATGKDK 106
79*************************888.67***************99999************************************* PP
NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
e+++ +++lvg+kktLvfy+grapkg k++Wvmheyrle
Kalax.0085s0072.1.p 107 EIFC-GKSLVGMKKTLVFYRGRAPKGDKSNWVMHEYRLE 144
****.999*****************************85 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 357 aa
Download sequence Send
to blast |
MDQSMLVIKD QDDQQIDLPP GFRFHPTDEE LITHYLRHKI VDASFVAVAI GEADLNKCEP 60
WDLPAKAKMG ENEWYFFCLR DKKYPTGLRT NRATEAGYWK ATGKDKEIFC GKSLVGMKKT 120
LVFYRGRAPK GDKSNWVMHE YRLEGKLSFH NLPQTAKTEW VISRVFEKSC SGKKMHVPGL 180
VPSLSCLENF MAQSELPPLM DFSQFDTKLN NIASSNNVSC FSSQTAFPRA APPPQPDLII 240
GSNQLYAISG NQPFSNPNPM FIPGNFQFPG SLPGQDEALM RGYLDSINSS DGCWLLSSGR 300
EMVSVSQETG LTSDVNVNMN SNEISSVMSN IVGVRRPFED GSTSGAGPVD LEYLWP*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 3e-50 | 15 | 174 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 3e-50 | 15 | 174 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 3e-50 | 15 | 174 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 3e-50 | 15 | 174 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 3e-50 | 15 | 174 | 17 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 3e-50 | 15 | 174 | 17 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 3e-50 | 15 | 174 | 17 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 3e-50 | 15 | 174 | 17 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 3e-50 | 15 | 174 | 17 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 3e-50 | 15 | 174 | 17 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 3e-50 | 15 | 174 | 17 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 3e-50 | 15 | 174 | 17 | 174 | NAC domain-containing protein 19 |
| 4dul_A | 3e-50 | 15 | 174 | 14 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 3e-50 | 15 | 174 | 14 | 171 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Binds to the promoter regions of genes involved in chlorophyll catabolic processes, such as NYC1, SGR1, SGR2 and PAO. {ECO:0000269|PubMed:27021284}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by the microRNA miR164. {ECO:0000269|PubMed:15294871, ECO:0000269|PubMed:17098808}. |
