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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Kalax.0080s0073.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 231aa MW: 26350.9 Da PI: 9.7569 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kalax.0080s0073.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 59.5 | 5.6e-19 | 73 | 125 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
++++++eq+ Le F +++++ e++e+LA+klgL++rqV +WFqNrRa++k
Kalax.0080s0073.1.p 73 KRKLSEEQVSLLEVNFGNEHKLEWERKERLAAKLGLDQRQVAIWFQNRRARWK 125
45899***********************************************9 PP
|
| 2 | HD-ZIP_I/II | 110.8 | 9.2e-36 | 72 | 161 | 2 | 91 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
+kr+ls+eqv+lLE +F +e+kLe erK++la +Lgl++rqva+WFqnrRAR+ktk+lE+dy++Lk+a+d+l+ +n +Le++v +L e+l
Kalax.0080s0073.1.p 72 RKRKLSEEQVSLLEVNFGNEHKLEWERKERLAAKLGLDQRQVAIWFQNRRARWKTKKLEEDYSRLKAAHDSLVLHNFQLESQVIKLVERL 161
8*************************************************************************************9887 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 231 aa
Download sequence Send
to blast |
MISVINNNKS EAGDDQMLSI SQMYPAAGVV YAQLETEIKQ EAAGDKKMRK RRRKKSKACR 60
GGESIREAGA LRKRKLSEEQ VSLLEVNFGN EHKLEWERKE RLAAKLGLDQ RQVAIWFQNR 120
RARWKTKKLE EDYSRLKAAH DSLVLHNFQL ESQVIKLVER LGRTENQAKR LSERSSEGTS 180
SNNPTSCLSL DALFLGGFGI IQDGLHNNVF YMDQENYVPG AMEWPNLHDM *
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 45 | 53 | KKMRKRRRK |
| 2 | 48 | 52 | RKRRR |
| 3 | 48 | 54 | RKRRRKK |
| 4 | 52 | 74 | RKKSKACRGGESIREAGALRKRK |
| 5 | 70 | 75 | LRKRKL |
