PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0070s0076.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Dof
Protein Properties Length: 257aa    MW: 28130.4 Da    PI: 7.6948
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0070s0076.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof113.87.4e-3652105760
               zf-Dof   7 kcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 
                          +c rC stntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvG+g+rk+++
  Kalax.0070s0076.1.p  52 HCQRCGSTNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGSGCRKSRR 105
                          7**************************************************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074781.0E-203696IPR003851Zinc finger, Dof-type
PROSITE profilePS5088427.36351105IPR003851Zinc finger, Dof-type
PfamPF027018.7E-3052105IPR003851Zinc finger, Dof-type
PROSITE patternPS0136105389IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
MSLLRCPDVA SPQLDRLTAA TVTSPGVSCD RHVTGSVLMR MERSEGVDVS PHCQRCGSTN  60
TKFCYYNNYS LTQPRYFCKG CRRYWTKGGS LRNVPVGSGC RKSRRGRSTS ASRYHHHHRS  120
PSTANMGSTS LAASSFTDDS SSTGQAVDLA AVYANFLKQE PTQELEPANA VLTGPIGYQA  180
MTTRCAEMRR IDSNRVVPFE LPPLPNEEGL WFSQAADWFG SQLVGSNEPP SIDVFNQDSG  240
DVDQLVASWS PFDFPI*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00405DAPTransfer from AT3G52440Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52440.14e-39Dof family protein