 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Kalax.0070s0029.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 241aa MW: 26954.4 Da PI: 9.8078 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kalax.0070s0029.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 61.1 | 1.7e-19 | 84 | 138 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ +++keq + Lee F++n++++ +++eeLA++l+L rqV vWFqNrRa+ k
Kalax.0070s0029.1.p 84 RKKLRLSKEQSRLLEESFRQNHTLNPKQKEELADRLKLRPRQVEVWFQNRRARSK 138
788899***********************************************98 PP
|
| 2 | HD-ZIP_I/II | 117.1 | 9.9e-38 | 84 | 172 | 1 | 89 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89
+kk+rlskeq++lLEesF+++++L+p++K+ela +L+l+prqv+vWFqnrRAR k+kq+E ++e+Lkr++ +l+e+n++L+keveeLr+
Kalax.0070s0029.1.p 84 RKKLRLSKEQSRLLEESFRQNHTLNPKQKEELADRLKLRPRQVEVWFQNRRARSKLKQTEIECEYLKRWFGSLTEQNQKLQKEVEELRA 172
69*************************************************************************************94 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 241 aa
Download sequence Send
to blast |
MGGVTPTSTC LDLTISVPGS SSARDVNMKP LRLLSKRSEP DDNWINLGYP KTSEDAEDND 60
TDSPNEDQGR GGGGGRWDRN PPPRKKLRLS KEQSRLLEES FRQNHTLNPK QKEELADRLK 120
LRPRQVEVWF QNRRARSKLK QTEIECEYLK RWFGSLTEQN QKLQKEVEEL RAMKVGPPSV 180
LSARSCEPTL ASSLTMCPRC ERVSSNTARV EKPATGPAST AAMSDKVAAL QQFRQPSAAF 240
*
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 132 | 140 | RRARSKLKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription repressor that binds to the DNA sequence 5'-CAAT[GC]ATTG-3'. {ECO:0000269|PubMed:10732669}. |
| UniProt | Probable transcription repressor that binds to the DNA sequence 5'-CAAT[GC]ATTG-3'. {ECO:0000269|PubMed:10732669}. |
