PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0069s0096.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 390aa MW: 42492.8 Da PI: 9.7136 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 37.2 | 5.2e-12 | 201 | 246 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h + Er+RR ++N++f+ Lr llP+ +K Ka +L A++Y+ sLq Kalax.0069s0096.1.p 201 HMISERKRRVKMNESFDALRALLPPG-----TKKHKALVLNGAIDYLTSLQ 246 8899********************97.....8*****************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 14.831 | 196 | 245 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 3.82E-13 | 196 | 250 | No hit | No description |
SuperFamily | SSF47459 | 2.36E-16 | 198 | 264 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.1E-14 | 200 | 262 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.5E-9 | 201 | 246 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 6.6E-12 | 202 | 251 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 390 aa Download sequence Send to blast |
MAFQDQQGSS SSSSLRSVSM GSPETTALLS TISAATPSSY YDTSQAFRPI TMPPSSSGFG 60 PMYNPIFYQQ AASMHDQPCS FSFHNPPHYP MEAENAVMTN AILAVLSASP SALRHSSTPY 120 FDPLAALEGA SSSRSGSRSA FTRFSTDFLP PTTTQRSPSR VSAFKRIISY TFKSLHLKRL 180 QEMKNEQSGG GKRPTSSQLH HMISERKRRV KMNESFDALR ALLPPGTKKH KALVLNGAID 240 YLTSLQAQVS ELSLRNLRLE AQLLPRSSSS GGAESLSSSS GGAESRLVDI QINNVSESTS 300 NDDRLVDVRV TVRGEINMLS AVTRVAEFFS RVNSFSLMSM DAETLLVADS SAPSNHMFFR 360 LRIEGSVWDE PAFREALRRI VSDVAPTQP* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56960.1 | 5e-34 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0069s0096.1.p |