PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0069s0096.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 390aa    MW: 42492.8 Da    PI: 9.7136
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0069s0096.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.25.2e-12201246555
                          HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          h + Er+RR ++N++f+ Lr llP+      +K  Ka +L  A++Y+ sLq
  Kalax.0069s0096.1.p 201 HMISERKRRVKMNESFDALRALLPPG-----TKKHKALVLNGAIDYLTSLQ 246
                          8899********************97.....8*****************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.831196245IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.82E-13196250No hitNo description
SuperFamilySSF474592.36E-16198264IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-14200262IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.5E-9201246IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.6E-12202251IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    Send to blast
MAFQDQQGSS SSSSLRSVSM GSPETTALLS TISAATPSSY YDTSQAFRPI TMPPSSSGFG  60
PMYNPIFYQQ AASMHDQPCS FSFHNPPHYP MEAENAVMTN AILAVLSASP SALRHSSTPY  120
FDPLAALEGA SSSRSGSRSA FTRFSTDFLP PTTTQRSPSR VSAFKRIISY TFKSLHLKRL  180
QEMKNEQSGG GKRPTSSQLH HMISERKRRV KMNESFDALR ALLPPGTKKH KALVLNGAID  240
YLTSLQAQVS ELSLRNLRLE AQLLPRSSSS GGAESLSSSS GGAESRLVDI QINNVSESTS  300
NDDRLVDVRV TVRGEINMLS AVTRVAEFFS RVNSFSLMSM DAETLLVADS SAPSNHMFFR  360
LRIEGSVWDE PAFREALRRI VSDVAPTQP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.15e-34bHLH family protein