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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Kalax.0056s0128.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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| Family |
NAC |
| Protein Properties |
Length: 291aa MW: 32771 Da PI: 9.087 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kalax.0056s0128.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 178.9 | 1.3e-55 | 14 | 140 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90
lppGfrFhPtdeel+++yL+kkv+++ +++ +i e+d++k+ePwdLp+++k + +ewyfF+ rdkky+tg r+nrat+sgyWkatgkdk
Kalax.0056s0128.1.p 14 LPPGFRFHPTDEELITHYLCKKVSDSGFRA-IAIGEADLNKSEPWDLPRNAKMGGNEWYFFCLRDKKYPTGLRTNRATQSGYWKATGKDK 102
79**************************99.88***************9889999*********************************** PP
NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
e+++ ++ lvg+kktLvfy+grapkg k++Wvmheyrle
Kalax.0056s0128.1.p 103 EIHR-GKFLVGMKKTLVFYRGRAPKGAKSNWVMHEYRLE 140
***9.999*****************************85 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 291 aa
Download sequence Send
to blast |
MDRVEGADPD QIELPPGFRF HPTDEELITH YLCKKVSDSG FRAIAIGEAD LNKSEPWDLP 60
RNAKMGGNEW YFFCLRDKKY PTGLRTNRAT QSGYWKATGK DKEIHRGKFL VGMKKTLVFY 120
RGRAPKGAKS NWVMHEYRLE GKLSLQNLPQ TAKTEWVISR VFEKCDGVKK PHFPSLLSQA 180
GFRGHPTGLP PLTDSPPNTS TPRPEQQHAP CFSNQDPLAL ANSFTFWPTQ VDHQSLLNYP 240
NLPPQDQAML THFLTGQSQT RRPHFKTENA EAGGASSSMG PVDLDSLWNY *
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 2e-51 | 4 | 170 | 6 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 2e-51 | 4 | 170 | 6 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 2e-51 | 4 | 170 | 6 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 2e-51 | 4 | 170 | 6 | 171 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 3e-51 | 4 | 170 | 9 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 3e-51 | 4 | 170 | 9 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 3e-51 | 4 | 170 | 9 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 3e-51 | 4 | 170 | 9 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 3e-51 | 4 | 170 | 9 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 3e-51 | 4 | 170 | 9 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 3e-51 | 4 | 170 | 9 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 3e-51 | 4 | 170 | 9 | 174 | NAC domain-containing protein 19 |
| 4dul_A | 2e-51 | 4 | 170 | 6 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 2e-51 | 4 | 170 | 6 | 171 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Repressed post-transcriptionally by miR164. {ECO:0000269|PubMed:15294871, ECO:0000269|PubMed:17098808, ECO:0000269|PubMed:18305205, ECO:0000305|PubMed:15723790}. |
| Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
Mol. Biol. Evol., 2006. 23(2): p. 469-78
[PMID:16280546] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Vidal EA,Álvarez JM,Gutiérrez RA
Nitrate regulation of AFB3 and NAC4 gene expression in Arabidopsis roots depends on NRT1.1 nitrate transport function.
Plant Signal Behav, 2014. 9(3): p. e28501
[PMID:24642706] - Lee MH,Jeon HS,Kim HG,Park OK
An Arabidopsis NAC transcription factor NAC4 promotes pathogen-induced cell death under negative regulation by microRNA164.
New Phytol., 2017. 214(1): p. 343-360
[PMID:28032643]
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