PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Function |

Regulation |

Publication

Basic Information? help Back to Top

TF ID

Kalax.0051s0002.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

G2-like

Protein Properties

Length: 372aa MW: 40307.9 Da PI: 8.2815

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0051s0002.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.3	6.3e-32	193	248	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++a++qLGG+++AtPk+i+ lmkv+gLt+++vkSHLQkYRl+ Kalax.0051s0002.1.p 193 KQRRCWSPELHRRFIHALQQLGGPHVATPKQIKVLMKVDGLTNDEVKSHLQKYRLH 248 79****************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	14.03	190	250	IPR017930	Myb domain
SuperFamily	SSF46689	1.79E-17	190	251	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	6.9E-28	191	251	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	2.6E-26	193	248	IPR006447	Myb domain, plants
Pfam	PF00249	4.9E-7	195	246	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence Send to blast
MDFAEKMHKC REYVEALEVE RRKIQVFRRE LPLCLELVSQ AIDACRQQLS TAAAAGTSRE 60 CFHVRRKQRS ECSEQTSCHG PVLEEFIPIK RAASCSSEGE EEEDESSQKS GDKPAGKKSD 120 WLRSVQLWNQ SPDPAPASEV KKNVGAFRPF DKESKAVVAA AEMAERQPVE DKPASSTTLK 180 SRNEESGQAT QRKQRRCWSP ELHRRFIHAL QQLGGPHVAT PKQIKVLMKV DGLTNDEVKS 240 HLQKYRLHMR RPVATAPSSA IWVPPPDSAA PALKPAATTS SSDQPEANNS KKEARAPSNG 300 VYAPVSTVGT PHAQPATQTS DQKVQSGSHC EEDDNGSHSA HGGAGAHCSS PASSSSTRTT 360 ATATASPMPS S*

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence Send to blast

MDFAEKMHKC REYVEALEVE RRKIQVFRRE LPLCLELVSQ AIDACRQQLS TAAAAGTSRE  60
CFHVRRKQRS ECSEQTSCHG PVLEEFIPIK RAASCSSEGE EEEDESSQKS GDKPAGKKSD  120
WLRSVQLWNQ SPDPAPASEV KKNVGAFRPF DKESKAVVAA AEMAERQPVE DKPASSTTLK  180
SRNEESGQAT QRKQRRCWSP ELHRRFIHAL QQLGGPHVAT PKQIKVLMKV DGLTNDEVKS  240
HLQKYRLHMR RPVATAPSSA IWVPPPDSAA PALKPAATTS SSDQPEANNS KKEARAPSNG  300
VYAPVSTVGT PHAQPATQTS DQKVQSGSHC EEDDNGSHSA HGGAGAHCSS PASSSSTRTT  360
ATATASPMPS S*

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor involved in phosphate signaling in roots. {ECO:0000250\|UniProtKB:Q9FX67}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_003631224.1	1e-108	PREDICTED: myb family transcription factor EFM
Refseq	XP_010695844.1	1e-108	PREDICTED: myb family transcription factor EFM
Swissprot	Q9FPE8	1e-88	HHO3_ARATH; Transcription factor HHO3
TrEMBL	A0A0J8B7X9	1e-107	A0A0J8B7X9_BETVU; Uncharacterized protein
TrEMBL	A0A438ECN5	1e-107	A0A438ECN5_VITVI; Transcription factor HHO3
STRING	XP_010695844.1	1e-107	(Beta vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	3e-87	G2-like family protein

Link Out ? help Back to Top
Phytozome	Kalax.0051s0002.1.p

Publications ? help Back to Top
Nagarajan VK,Satheesh V,Poling MD,Raghothama KG,Jain A Arabidopsis MYB-Related HHO2 Exerts a Regulatory Influence on a Subset of Root Traits and Genes Governing Phosphate Homeostasis. Plant Cell Physiol., 2016. 57(6): p. 1142-52 [PMID:27016098]