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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Kalax.0042s0056.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 226aa MW: 25869.6 Da PI: 4.4153 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kalax.0042s0056.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 61.9 | 9.7e-20 | 34 | 87 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k++++ ++ql++Le+ Fe ++++ e++ +LA +lgL+ rqV vWFqNrRa++k
Kalax.0042s0056.1.p 34 KKRRLRPHQLKALERSFEVENKLESERKVQLAFELGLDPRQVAVWFQNRRARWK 87
556899***********************************************9 PP
|
| 2 | HD-ZIP_I/II | 118.6 | 3.3e-38 | 34 | 123 | 2 | 91 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
kkrrl +q+k+LE+sFe e+kLe+erKv+la eLgl+prqvavWFqnrRAR+ktkqlE+d++ L++ayd l+++ +++++++e+L ++
Kalax.0042s0056.1.p 34 KKRRLRPHQLKALERSFEVENKLESERKVQLAFELGLDPRQVAVWFQNRRARWKTKQLERDFNLLQSAYDDLRQNYDAVKRDNETLILQI 123
9***********************************************************************************998766 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 226 aa
Download sequence Send
to blast |
MMKSSGSKRE FDSDVAFEVE EDEEFMEGSA QPDKKRRLRP HQLKALERSF EVENKLESER 60
KVQLAFELGL DPRQVAVWFQ NRRARWKTKQ LERDFNLLQS AYDDLRQNYD AVKRDNETLI 120
LQIGEMKQKL MVESGSSEKI GEGHFGPSFN YETAFHNNVN VVSSDSATSG TQSEENNSFN 180
GVVSSCGIPW TVEDAPSPAM WPADTYSFLA DEEPDLMFDW YCQNP*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription activator that binds to the DNA sequence 5'-CAAT[AT]ATTG-3'. May be involved in the regulation of gibberellin signaling. {ECO:0000269|PubMed:10732669, ECO:0000269|PubMed:18049796}. |
| UniProt | Probable transcription activator that binds to the DNA sequence 5'-CAAT[AT]ATTG-3'. May be involved in the regulation of gibberellin signaling. {ECO:0000269|PubMed:10732669, ECO:0000269|PubMed:18049796}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: By gibberellin. Down-regulated in leaves by drought stress. {ECO:0000269|PubMed:17999151, ECO:0000269|PubMed:18049796}. |
| UniProt | INDUCTION: By gibberellin. Down-regulated in leaves by drought stress. {ECO:0000269|PubMed:17999151, ECO:0000269|PubMed:18049796}. |
