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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Kalax.0042s0039.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
| Family |
WRKY |
| Protein Properties |
Length: 232aa MW: 26053.9 Da PI: 6.6178 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kalax.0042s0039.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 83.8 | 1.6e-26 | 127 | 185 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYG+K+ k++++ r+YY+Cts gC+vkk ver ed ++v++ Y g H+he
Kalax.0042s0039.1.p 127 LDDGYRWRKYGKKPLKNNPNLRNYYKCTSGGCQVKKIVERWIEDSSYVITQYDGVHTHE 185
59********************************************************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 232 aa
Download sequence Send
to blast |
MDLYSLENPN PSLDLYIDVD DYSLSQFDCF FLNELSNYEA GYGFIGGAEK DQSSYTSSPA 60
VTSPPEKVSR SEQDPLLLVQ MLVSGGASSS INAAVNVMRN EGKRKMQGDG PKPQRVAFKT 120
KSKLDVLDDG YRWRKYGKKP LKNNPNLRNY YKCTSGGCQV KKIVERWIED SSYVITQYDG 180
VHTHESSCSY YYDNNNNHHH LQGITATDYY HCQNDANTCI PSAAETKVHL K*
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1wj2_A | 8e-21 | 117 | 185 | 7 | 75 | Probable WRKY transcription factor 4 |
| 2lex_A | 8e-21 | 117 | 185 | 7 | 75 | Probable WRKY transcription factor 4 |
