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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Kalax.0039s0183.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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| Family |
M-type_MADS |
| Protein Properties |
Length: 231aa MW: 26284 Da PI: 6.2669 |
| Description |
M-type_MADS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kalax.0039s0183.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | SRF-TF | 71.7 | 6.5e-23 | 44 | 87 | 7 | 50 |
HHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
SRF-TF 7 snrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
+rqvtfskRr+g++KKA ELSvLC+ae+a+i++s+ gk y++
Kalax.0039s0183.1.p 44 DQRQVTFSKRRTGLFKKAGELSVLCGAEIAIIVVSEGGKPYTFG 87
58****************************************95 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 231 aa
Download sequence Send
to blast |
MVILAEEHHD HDKNNVRKNI VSDTVRKKSK GRQKIEIKKI LKPDQRQVTF SKRRTGLFKK 60
AGELSVLCGA EIAIIVVSEG GKPYTFGSPN VDQVLERYVK DGMSNGGGEM VSFKGLCSVE 120
QSKSMLPDEV YRVDQRDHDD KYKCFVEAAR ELEKKRKGKR AAEMGGWTGA GGEGLYLWDE 180
CVESMCLEEL EEYLKAMQEM RARIVDHLEQ ISIKEETDAM WWHEIAQLED *
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 3kov_A | 6e-17 | 31 | 99 | 1 | 69 | Myocyte-specific enhancer factor 2A |
| 3kov_B | 6e-17 | 31 | 99 | 1 | 69 | Myocyte-specific enhancer factor 2A |
| 3kov_I | 6e-17 | 31 | 99 | 1 | 69 | Myocyte-specific enhancer factor 2A |
| 3kov_J | 6e-17 | 31 | 99 | 1 | 69 | Myocyte-specific enhancer factor 2A |
| 3p57_A | 6e-17 | 31 | 99 | 1 | 69 | Myocyte-specific enhancer factor 2A |
| 3p57_B | 6e-17 | 31 | 99 | 1 | 69 | Myocyte-specific enhancer factor 2A |
| 3p57_C | 6e-17 | 31 | 99 | 1 | 69 | Myocyte-specific enhancer factor 2A |
| 3p57_D | 6e-17 | 31 | 99 | 1 | 69 | Myocyte-specific enhancer factor 2A |
| 3p57_I | 6e-17 | 31 | 99 | 1 | 69 | Myocyte-specific enhancer factor 2A |
| 3p57_J | 6e-17 | 31 | 99 | 1 | 69 | Myocyte-specific enhancer factor 2A |
