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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Kalax.0034s0129.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family |
bHLH |
Protein Properties |
Length: 232aa MW: 25864.1 Da PI: 5.443 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Kalax.0034s0129.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 41.4 | 2.6e-13 | 60 | 102 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
Er+RR+++N++++ Lr ++P+ +K++Ka+i + A+ YI++L
Kalax.0034s0129.1.p 60 VSERNRRKKLNDRLFALRAVVPNI-----TKMDKASIIKDAISYIQEL 102
57*********************7.....7****************99 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 232 aa
Download sequence Send
to blast |
MEDNIGDEYK NYWETNMFLQ TEELDSWGGG LDETAFSGYY DSSSPDGGGA SSSMASKNIV 60 SERNRRKKLN DRLFALRAVV PNITKMDKAS IIKDAISYIQ ELHEQEGRLE AEIAGLENNI 120 RMKSTGSMSP SSYEDLKKPS SRKKKKRIDT TSHDTTNNFL STSASPIEIL ELRVAHMGER 180 SVVVSITCTK RGDTMVKLCE AFESLQLKIL TSNMTTFSSN TLVNTLFIQM E*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5gnj_A | 2e-14 | 58 | 120 | 9 | 71 | Transcription factor MYC2 |
5gnj_B | 2e-14 | 58 | 120 | 9 | 71 | Transcription factor MYC2 |
5gnj_E | 2e-14 | 58 | 120 | 9 | 71 | Transcription factor MYC2 |
5gnj_F | 2e-14 | 58 | 120 | 9 | 71 | Transcription factor MYC2 |
5gnj_G | 2e-14 | 58 | 120 | 9 | 71 | Transcription factor MYC2 |
5gnj_I | 2e-14 | 58 | 120 | 9 | 71 | Transcription factor MYC2 |
5gnj_M | 2e-14 | 58 | 120 | 9 | 71 | Transcription factor MYC2 |
5gnj_N | 2e-14 | 58 | 120 | 9 | 71 | Transcription factor MYC2 |
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