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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Kalax.0019s0108.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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| Family |
NAC |
| Protein Properties |
Length: 381aa MW: 43619.5 Da PI: 6.1557 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kalax.0019s0108.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 168 | 3.1e-52 | 16 | 144 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatg 87
+ppGfrFhPt+eel+++yL+kkv+++k++l +vi++vd++k+ePwd+++++k +++wyfFs++dkky+tg+r+nrat++g+Wkatg
Kalax.0019s0108.1.p 16 VPPGFRFHPTEEELLHYYLRKKVASQKIDL-DVIRDVDLNKLEPWDIQERCKIgstPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATG 104
69****************************.9***************964444222455******************************* PP
NAM 88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
+dk ++s ++ +g++ktLvfy grap+g+k+dW+mheyrl
Kalax.0019s0108.1.p 105 RDKVIYS-CSRRIGMRKTLVFYMGRAPHGQKSDWIMHEYRL 144
*******.999****************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 381 aa
Download sequence Send
to blast |
MCSENMNLSV NGHSQVPPGF RFHPTEEELL HYYLRKKVAS QKIDLDVIRD VDLNKLEPWD 60
IQERCKIGST PQNDWYFFSH KDKKYPTGTR TNRATAAGFW KATGRDKVIY SCSRRIGMRK 120
TLVFYMGRAP HGQKSDWIMH EYRLDDNTTT HNTNDASNQL LVGESMQEDG WVVCRMQRDS 180
NTNPVLDQIL LYMGKNCNQL ENENKMNSRL LGTHHNNQDA SMQFIHPDLS QFDEEIIHEK 240
FLHLPRLEGS PACYPSSMEE TMIMHNRSSE RVSDWVALDR LVASQLNGGH VSEMIFDQTS 300
RQLSCMSSDP NSNMPTFDFS QQHNDGPLLS ELPLNHFNRS TNQESSQQVY CSEQVDLWTF 360
SSNHGSSSNS SSDPLGQLSV *
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator of genes involved in biosynthesis of secondary walls. Together with NST2 and NST3, required for the secondary cell wall thickening of sclerenchymatous fibers, secondary xylem (tracheary elements), and of the anther endocethium, which is necessary for anther dehiscence. May also regulate the secondary cell wall lignification of other tissues. {ECO:0000269|PubMed:16214898, ECO:0000269|PubMed:17237351, ECO:0000269|PubMed:17333250}. |
| Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
Mol. Biol. Evol., 2006. 23(2): p. 469-78
[PMID:16280546] - Gondolf VM, et al.
A gene stacking approach leads to engineered plants with highly increased galactan levels in Arabidopsis.
BMC Plant Biol., 2014. 14: p. 344
[PMID:25492673] - Jaradat MR,Ruegger M,Bowling A,Butler H,Cutler AJ
A comprehensive transcriptome analysis of silique development and dehiscence in Arabidopsis and Brassica integrating genotypic, interspecies and developmental comparisons.
GM Crops Food, 2014. 5(4): p. 302-20
[PMID:25523176] - Yuan Y,Teng Q,Zhong R,Ye ZH
TBL3 and TBL31, Two Arabidopsis DUF231 Domain Proteins, are Required for 3-O-Monoacetylation of Xylan.
Plant Cell Physiol., 2016. 57(1): p. 35-45
[PMID:26556650] - Yang C, et al.
Transcription Factor MYB26 Is Key to Spatial Specificity in Anther Secondary Thickening Formation.
Plant Physiol., 2017. 175(1): p. 333-350
[PMID:28724622] - Pascual MB, et al.
PpNAC1, a main regulator of phenylalanine biosynthesis and utilization in maritime pine.
Plant Biotechnol. J., 2018. 16(5): p. 1094-1104
[PMID:29055073] - Liu C,Yu H,Li L
SUMO modification of LBD30 by SIZ1 regulates secondary cell wall formation in Arabidopsis thaliana.
PLoS Genet., 2019. 15(1): p. e1007928
[PMID:30657769]
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