PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0019s0030.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 468aa MW: 51533.1 Da PI: 7.0923 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 14.4 | 6.7e-05 | 356 | 394 | 12 | 55 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ ++++ L++l+ + +K + a++L +A+ YIk Lq Kalax.0019s0030.1.p 356 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 394 7788899*********998.....8******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 11.141 | 344 | 393 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 7.72E-11 | 354 | 406 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.31E-5 | 354 | 398 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 5.3E-9 | 358 | 401 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 468 aa Download sequence Send to blast |
MESANIPHHH LDLHQDHQQQ QQLLGPASSS SSSSYDALSA HGGWYGASSN SSNHFAWSAN 60 SSHMNVVGNR IYQNPNTQLY NQYTGEKDEN EDIQIAWRNN NSHNTGSSIE DDRQLNQTLI 120 PAQDQPSNKC KLDLFNSLLF PKFTDMISST QSSIEDLQHL SPTCYMKNDH FQDLNQQHDT 180 KLLINPIALL SPSGFIQNPF QAGQFLSNVQ HCSGYGGSSS SPLIPSRGTF SQIFPSVNIS 240 NMNNNQSCST TISGSSDVNL RALDLLTSAK FGGAVNHDQP QPHHISLPLK ETHAFGEQHM 300 QQFGHRPTGS LDKLPTSFHG GSTTEAKRSQ PESKSSQTSS KKSRSESRVC PPFKVRKEKL 360 GDRIAALQQL VAPFGKTDTA SVLMEAIGYI KFLQNQVETL SVPYMKSSRS RPIKQMQMGQ 420 MMDNDGSVEL KRDLRSRGLC LVPLSCMSYV TTDDSGGWPS SEYHGGT* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27660.1 | 5e-50 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0019s0030.1.p |