PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0019s0030.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 468aa    MW: 51533.1 Da    PI: 7.0923
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0019s0030.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.46.7e-053563941255
                          HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  Kalax.0019s0030.1.p 356 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 394
                          7788899*********998.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.141344393IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.72E-11354406IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.31E-5354398No hitNo description
Gene3DG3DSA:4.10.280.105.3E-9358401IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 468 aa     Download sequence    Send to blast
MESANIPHHH LDLHQDHQQQ QQLLGPASSS SSSSYDALSA HGGWYGASSN SSNHFAWSAN  60
SSHMNVVGNR IYQNPNTQLY NQYTGEKDEN EDIQIAWRNN NSHNTGSSIE DDRQLNQTLI  120
PAQDQPSNKC KLDLFNSLLF PKFTDMISST QSSIEDLQHL SPTCYMKNDH FQDLNQQHDT  180
KLLINPIALL SPSGFIQNPF QAGQFLSNVQ HCSGYGGSSS SPLIPSRGTF SQIFPSVNIS  240
NMNNNQSCST TISGSSDVNL RALDLLTSAK FGGAVNHDQP QPHHISLPLK ETHAFGEQHM  300
QQFGHRPTGS LDKLPTSFHG GSTTEAKRSQ PESKSSQTSS KKSRSESRVC PPFKVRKEKL  360
GDRIAALQQL VAPFGKTDTA SVLMEAIGYI KFLQNQVETL SVPYMKSSRS RPIKQMQMGQ  420
MMDNDGSVEL KRDLRSRGLC LVPLSCMSYV TTDDSGGWPS SEYHGGT*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.15e-50bHLH family protein