 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Kalax.0017s0226.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 282aa MW: 30918.6 Da PI: 6.1577 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kalax.0017s0226.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 57.8 | 1.8e-18 | 116 | 170 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ ++t+eq +Le++F+ +++++++++ LAk+l+L rqV vWFqNrRa+ k
Kalax.0017s0226.1.p 116 RKKLRLTREQSAVLEDMFRDHNTLNQKQKVALAKQLDLRPRQVEVWFQNRRARTK 170
678899***********************************************98 PP
|
| 2 | HD-ZIP_I/II | 123.8 | 8.2e-40 | 116 | 205 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90
+kk+rl++eq+++LE++F+ +++L++++Kv+la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +
Kalax.0017s0226.1.p 116 RKKLRLTREQSAVLEDMFRDHNTLNQKQKVALAKQLDLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELR-A 204
69*************************************************************************************9.5 PP
HD-ZIP_I/II 91 l 91
l
Kalax.0017s0226.1.p 205 L 205
5 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 282 aa
Download sequence Send
to blast |
MEGDKEDDGL ELSLTLKCPG NSSNLSPPAL QQPARWQLLF QPIDRNVYLR RGAAIPVVDL 60
AEDEIDVSSP NDSTVSSLSG KRSDREANNV NLNGDENEAE RASSSGKMSD EEDGGRKKLR 120
LTREQSAVLE DMFRDHNTLN QKQKVALAKQ LDLRPRQVEV WFQNRRARTK LKQTEVDCEY 180
LKRCCENLTE ENRRLQKEVQ ELRALKLSPQ MYMQMTPATT LTICPSCERV SSSAAAGGGN 240
GHVAGASGSG VNNSAGLQVQ PPVQMNIPWA TLPGHHGGGQ P*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 164 | 172 | RRARTKLKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By transition from light to far-red light. {ECO:0000269|PubMed:8106086}. |
