PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Regulation |

Basic Information? help Back to Top

TF ID

Kalax.0014s0194.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Dof

Protein Properties

Length: 382aa MW: 41496.4 Da PI: 7.5183

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0014s0194.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.4	3.7e-39	34	93	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +e+a kcprCds ntkfCyynnyslsqPryfCkaCrryWtkGG+lrnvPvGgg+rknk+s Kalax.0014s0194.1.p 34 PEQAPKCPRCDSGNTKFCYYNNYSLSQPRYFCKACRRYWTKGGTLRNVPVGGGCRKNKRS 93 78899*****************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	1.0E-28	32	92	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	5.6E-33	36	92	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.003	38	92	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	40	76	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence Send to blast
MDLPRLNLQE MNTNSCEKNS QAVAADEKKP RPQPEQAPKC PRCDSGNTKF CYYNNYSLSQ 60 PRYFCKACRR YWTKGGTLRN VPVGGGCRKN KRSAKRALDS HHHLLLQSKV DNVLSSAASS 120 EQQNNNHGGN GLSNFSSPLS YDSSGTGDSL SMAFARLQKQ CNSGHLGFEF DPQNSIFGHH 180 LQQHAPIFGN PVTNNLLVQT QTQTLLQPKS TNLGFLSNFF DTQAATNYNS QTCLFNYNGF 240 ENAADQYPKD QSHQSHSQPL LPYEDLSLSN VAADPTKDGF NLMSSNSVKH EMCNNHNNDG 300 LNDNRILWGF PWQQLGSNNN GGGSSSENDN NNVVLGSGMS NNVGNGYEAA GGAGGGGRES 360 WSNSGLGSAP SWPNLINSAL M*

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence Send to blast

MDLPRLNLQE MNTNSCEKNS QAVAADEKKP RPQPEQAPKC PRCDSGNTKF CYYNNYSLSQ  60
PRYFCKACRR YWTKGGTLRN VPVGGGCRKN KRSAKRALDS HHHLLLQSKV DNVLSSAASS  120
EQQNNNHGGN GLSNFSSPLS YDSSGTGDSL SMAFARLQKQ CNSGHLGFEF DPQNSIFGHH  180
LQQHAPIFGN PVTNNLLVQT QTQTLLQPKS TNLGFLSNFF DTQAATNYNS QTCLFNYNGF  240
ENAADQYPKD QSHQSHSQPL LPYEDLSLSN VAADPTKDGF NLMSSNSVKH EMCNNHNNDG  300
LNDNRILWGF PWQQLGSNNN GGGSSSENDN NNVVLGSGMS NNVGNGYEAA GGAGGGGRES  360
WSNSGLGSAP SWPNLINSAL M*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	2e-37	TARGET OF MONOPTEROS 6

Link Out ? help Back to Top
Phytozome	Kalax.0014s0194.1.p