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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Kalax.0013s0109.2.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family |
bHLH |
Protein Properties |
Length: 408aa MW: 45206.5 Da PI: 4.963 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Kalax.0013s0109.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 40.6 | 4.7e-13 | 181 | 225 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
e+ErrRR+++N+++ +Lr l+P + Kl+Ka+iL A++Y+k+L+
Kalax.0013s0109.2.p 181 LEAERRRRKKLNERLYKLRALVPIiS------KLDKASILVDAIDYMKQLK 225
589*********************66......*****************95 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0008152 | Biological Process | metabolic process |
GO:0009555 | Biological Process | pollen development |
GO:0048658 | Biological Process | anther wall tapetum development |
GO:0005634 | Cellular Component | nucleus |
GO:0000978 | Molecular Function | RNA polymerase II core promoter proximal region sequence-specific DNA binding |
GO:0016597 | Molecular Function | amino acid binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 408 aa
Download sequence Send
to blast |
MAKEVVGTQV LIPVLGGLVE LFVAKQVAED KNVVDLIAAQ CAIPLELDAL LTSSLQTRTN 60 PAEENPQPGA ERNHASPSSS YQFHQPEANN TNQQACEISS PKGFSQQFNC DSAAENEPRN 120 IDAVMMSGGS GSASDIPSQI KDGVRLEAGR SDSTSDCSDQ IDDEDEAKCR RRNGKGQSKN 180 LEAERRRRKK LNERLYKLRA LVPIISKLDK ASILVDAIDY MKQLKKQVEE LQKELEQESD 240 NKGDQTPAES VSEFVAPNTR NVANPMGHEK VQQMEPQVEV TPVDGSKFFI RVFCEQKPGG 300 FVRLLEALSS LGLEVTNVNV TSYRMLVSNV FQVEMTRDDI DDHHVAADDL RKSLLELTQI 360 PVEAPWPDPL PDTTSNMPEY GVRADNPFPH HHALLNHHTS PYHFHHN*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 169 | 189 | RRRNGKGQSKNLEAERRRRKK |
2 | 183 | 190 | ERRRRKKL |