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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Kalax.0006s0081.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
| Family |
MYB |
| Protein Properties |
Length: 255aa MW: 27773.7 Da PI: 6.634 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kalax.0006s0081.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 60.4 | 3.8e-19 | 16 | 61 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg W +eEd+ll ++v+++G+++W+tIa+ ++ gRt+k+c++rw++
Kalax.0006s0081.1.p 16 RGHWRPEEDQLLRNLVERFGPKNWNTIAEQIQ-GRTGKSCRLRWFNQ 61
899*****************************.***********996 PP
|
| 2 | Myb_DNA-binding | 51.7 | 2e-16 | 68 | 111 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
++++T+eE+ +l+ a + +G++ W++Iar+++ gRt++ +k++++
Kalax.0006s0081.1.p 68 KLSFTEEEETRLILAQRAHGNK-WSAIARHFP-GRTDNAVKNHFHV 111
689*******************.*********.**********986 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 255 aa
Download sequence Send
to blast |
MEGHEGDNDN QGATSRGHWR PEEDQLLRNL VERFGPKNWN TIAEQIQGRT GKSCRLRWFN 60
QLDPNLNKLS FTEEEETRLI LAQRAHGNKW SAIARHFPGR TDNAVKNHFH VIMGRKRKDP 120
NISLPSFTPT LVGGYNIGAP VGPSGMIYEP TFPKYAGSNS FIPGTQNPYP FNFGDIDGSN 180
LIGNAPVALD GNAAYSNFNA GAAGGPFGYS GFRSVPGMVG DSSQATNINV AQNEDANPPF 240
IDFLGVESKN QADH*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1gv2_A | 1e-30 | 16 | 116 | 4 | 104 | MYB PROTO-ONCOGENE PROTEIN |
| 1h88_C | 6e-30 | 16 | 116 | 58 | 158 | MYB PROTO-ONCOGENE PROTEIN |
| 1h89_C | 6e-30 | 16 | 116 | 58 | 158 | MYB PROTO-ONCOGENE PROTEIN |
| 1mse_C | 1e-30 | 16 | 116 | 4 | 104 | C-Myb DNA-Binding Domain |
| 1msf_C | 1e-30 | 16 | 116 | 4 | 104 | C-Myb DNA-Binding Domain |
