PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0006s0006.3.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 464aa    MW: 51476.3 Da    PI: 5.4994
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0006s0006.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.35e-072723061655
                          HHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH  16 iNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          +N++f+ L++l+P++      K +K++ L  ++ Y+k+L+
  Kalax.0006s0006.3.p 272 LNERFSALQSLIPSN-----DKADKVTLLDATISYLKELE 306
                          8*************8.....7****************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142157.2E-9844IPR025610Transcription factor MYC/MYB N-terminal
PROSITE profilePS5088811.211256305IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.5E-5260311IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.71E-10271322IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.27E-7272310No hitNo description
Gene3DG3DSA:4.10.280.106.6E-11272318IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.5E-4272306IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 464 aa     Download sequence    Send to blast
MNFIRPSYLQ TVVCFPFSGG VVEIGITELV PEDMNLIERI KALFLDNFRP QSTVPDTSFP  60
SGLLNYDMEL AGVEPDHDYP EANLDPIVEC KELDSLSTYD SASNVAADQL ADSFMLTDGA  120
SQVQSWHFAD EDFSNCVHHS FNSSNCISQT FALSAKARLS PKIENLCEHH IPCPMERTKL  180
ESPDDLHYQG VISTLLKNSD LLDLDPRIGC CKKGSSFVKW SRVGRAGSSW SSNSMSQVML  240
RKVLFEVGRN TGCAPVDRTE AVDRYEHSLD VLNERFSALQ SLIPSNDKAD KVTLLDATIS  300
YLKELEKRVE KLESSKESTY LLNTPMATKP QVTVERTSDN YGNGTNRTSN KNKPSTNKRK  360
ASYIDQVEPQ NIAKTSRDNS TDVICVSMVD NNVMIEMRCC WRECLLFKVM DAMSGLGLDS  420
HMVQSSTSAN GILQLTIKSK FKGSGCPSVG VIRQKLQRIL AQS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41315.11e-72bHLH family protein