 |
Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Kalax.0005s0032.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
| Family |
HSF |
| Protein Properties |
Length: 323aa MW: 37417.8 Da PI: 5.2087 |
| Description |
HSF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kalax.0005s0032.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HSF_DNA-bind | 95.6 | 5.2e-30 | 39 | 132 | 2 | 101 |
HHHHHHHHHCTGGGTTTSEESSSS..SEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS
HSF_DNA-bind 2 Flkklyeiledeelkeliswseng..nsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89
Fl k+y++++d+++++++sws+++ +sfv++d+++f++++Lp+yFkh+nf+ F+RQLn YgFkkv+ ++ weF++ F +g
Kalax.0005s0032.1.p 39 FLAKTYHLVDDPSTDQVVSWSQDSssSSFVIWDPRTFSSTILPTYFKHTNFSNFIRQLNSYGFKKVNPDR---------WEFANAGFIRG 119
9********************5543499***************************************999.........*********** PP
XXXXXXX.XXXXX CS
HSF_DNA-bind 90 kkellek.ikrkk 101
+ +l+++ +kr++
Kalax.0005s0032.1.p 120 HGHLMRNsMKRRA 132
***9987577775 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 323 aa
Download sequence Send
to blast |
MNPAREAVAV EEGSASNSVE PSDRAQAAER VHESQPPPFL AKTYHLVDDP STDQVVSWSQ 60
DSSSSSFVIW DPRTFSSTIL PTYFKHTNFS NFIRQLNSYG FKKVNPDRWE FANAGFIRGH 120
GHLMRNSMKR RARQMESSDV DPCPKFEEPG FDTEVHRLRR DRQILMTELV KLRQLQKTTK 180
AHIRSMEQRL RKTELKQQQT TRFLAKAIRN PDFMQRFSGA KDTREEDEHL LSTEMRSTEE 240
EPGALCGFTE KEIQDYVDIS DYEVSDVVIW EKENVLPVAE KGEHDQEQLV GEFLNDWIKE 300
ELRQVNVEMI CFEEVPHSSQ TM*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 2ldu_A | 2e-18 | 34 | 132 | 15 | 121 | Heat shock factor protein 1 |
| 5hdg_A | 1e-18 | 37 | 132 | 8 | 111 | Heat shock factor protein 1 |
| 5hdn_A | 1e-18 | 37 | 132 | 8 | 111 | Heat shock factor protein 1 |
| 5hdn_B | 1e-18 | 37 | 132 | 8 | 111 | Heat shock factor protein 1 |
| 5hdn_C | 1e-18 | 37 | 132 | 8 | 111 | Heat shock factor protein 1 |
| 5hdn_D | 1e-18 | 37 | 132 | 8 | 111 | Heat shock factor protein 1 |
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