PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0003s0289.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 458aa MW: 50091.6 Da PI: 7.321 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 14.5 | 6.5e-05 | 348 | 386 | 12 | 55 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ ++++ L++l+ + +K + a++L +A+ YIk Lq Kalax.0003s0289.1.p 348 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 386 7788899*********998.....8******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 11.287 | 336 | 385 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.23E-5 | 346 | 390 | No hit | No description |
SuperFamily | SSF47459 | 6.28E-11 | 346 | 399 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 5.1E-9 | 350 | 393 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 458 aa Download sequence Send to blast |
MESANIPHHL DLHQEQQQQL LGPASSSSSS HDASYVHGSW YGASSNSSNH FAWSAKSPHM 60 NGDNKIYQSN NTQLYKQYTG EKDENDEIQI PWSNNNSLNN PCTSIKNDGQ HQTLILTHEQ 120 PSNSSKLDLF NSLLFPKFTD MLSSTQSSIE DLQHLSPTCY VKNDHFQDLN QHDTKSVTKP 180 ALLMSPSSLI QPQFQVGQFL ASAQNCSGYG GSPLMPSRGT FSQIFPSVNI SNMSSNQSCS 240 TISGSLDMNL QALDLLTSAR FGGAVNNDNQ SQPHHPGLAN ESHAFGQQHM QQFGHRPTAS 300 TPNKLPSPFL GGSITEAKRS QPAESKSSQA SSKKSRSETR ACPPLKVRKE KLGDRIAALQ 360 QLVAPFGKTD TASVLMEAIG YIKFLQNQVE TLSVPYMKSS RSRPMKQAHL MVDHDGSVES 420 KRDLRSRGLC LVPLSCMSYV TNEDGSGWPS TEYLGGT* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002281118.2 | 1e-101 | PREDICTED: transcription factor bHLH110 isoform X2 | ||||
TrEMBL | E0CQH4 | 1e-99 | E0CQH4_VITVI; Uncharacterized protein | ||||
STRING | VIT_18s0001g12970.t01 | 1e-100 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27660.1 | 7e-53 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0003s0289.1.p |