PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0003s0289.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 458aa    MW: 50091.6 Da    PI: 7.321
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0003s0289.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.56.5e-053483861255
                          HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  Kalax.0003s0289.1.p 348 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 386
                          7788899*********998.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.287336385IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.23E-5346390No hitNo description
SuperFamilySSF474596.28E-11346399IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.1E-9350393IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 458 aa     Download sequence    Send to blast
MESANIPHHL DLHQEQQQQL LGPASSSSSS HDASYVHGSW YGASSNSSNH FAWSAKSPHM  60
NGDNKIYQSN NTQLYKQYTG EKDENDEIQI PWSNNNSLNN PCTSIKNDGQ HQTLILTHEQ  120
PSNSSKLDLF NSLLFPKFTD MLSSTQSSIE DLQHLSPTCY VKNDHFQDLN QHDTKSVTKP  180
ALLMSPSSLI QPQFQVGQFL ASAQNCSGYG GSPLMPSRGT FSQIFPSVNI SNMSSNQSCS  240
TISGSLDMNL QALDLLTSAR FGGAVNNDNQ SQPHHPGLAN ESHAFGQQHM QQFGHRPTAS  300
TPNKLPSPFL GGSITEAKRS QPAESKSSQA SSKKSRSETR ACPPLKVRKE KLGDRIAALQ  360
QLVAPFGKTD TASVLMEAIG YIKFLQNQVE TLSVPYMKSS RSRPMKQAHL MVDHDGSVES  420
KRDLRSRGLC LVPLSCMSYV TNEDGSGWPS TEYLGGT*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002281118.21e-101PREDICTED: transcription factor bHLH110 isoform X2
TrEMBLE0CQH41e-99E0CQH4_VITVI; Uncharacterized protein
STRINGVIT_18s0001g12970.t011e-100(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.17e-53bHLH family protein