PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0002s0331.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 571aa    MW: 62772 Da    PI: 7.0599
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0002s0331.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.80.000454564881855
                          HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH  18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          ++++ L++++ +      +K + a++L++A+ YIk  q
  Kalax.0002s0331.1.p 456 EKISALQQIVSPY-----GKTDTASVLQEAIGYIKFHQ 488
                          6789999999998.....9****************876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.49E-8456500IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.27E-4456492No hitNo description
Gene3DG3DSA:4.10.280.101.8E-6456505IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 571 aa     Download sequence    Send to blast
MADQDCNNIN LLPLALSSSP SSWWDLHHHA TPTPSITSWN NTTAAAAAAS LWENHNHSNS  60
SPCDQEDVSV SVSNHSSLTV DDSSHRLVEP SASSSNNIIG QPTTENNSHL WSQLLLGVGG  120
SQDMHDEMGE NLLKALSLKN FSGGMFEPSA CSDYLKKFDS HQHEKWADTN GDQFRNSNPA  180
TAANSSFTRN FDNTNVGYNG DTNLAENNDD QRSLIKLSSS NLVNSWSIAP PDLSQMTFHH  240
LVPNPCNNNI LPSVDQYLHP DITGDQTKQN LSYQPQLLDM APNSIYDCAS YGVSQTRSGN  300
DHYEESHQVG SSQASLFPKV FINNFESVYG STGGNWRPRE SSIHSQHGFT PSVIDPFNNS  360
RSRSLSKPLL KSLSLLDTRK QQGTNLTNSL INNKSNGRGQ GASANDGKKK RSQEASQSCG  420
SSSRKPKHES NSYNPSTPSS FTKTTTQTPK VKITAEKISA LQQIVSPYGK TDTASVLQEA  480
IGYIKFHQEQ VQLLSNPYLK SNVNKLQTCM MQEAWGSLDR KYEKGEKNKL KVVDLKSKGL  540
CLVPTSSIPQ VYKDNSGPDY WPTYRGCLYR *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31050.15e-36bHLH family protein