PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0002s0331.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 571aa MW: 62772 Da PI: 7.0599 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 11.8 | 0.00045 | 456 | 488 | 18 | 55 |
HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++++ L++++ + +K + a++L++A+ YIk q Kalax.0002s0331.1.p 456 EKISALQQIVSPY-----GKTDTASVLQEAIGYIKFHQ 488 6789999999998.....9****************876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 2.49E-8 | 456 | 500 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 3.27E-4 | 456 | 492 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 1.8E-6 | 456 | 505 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 571 aa Download sequence Send to blast |
MADQDCNNIN LLPLALSSSP SSWWDLHHHA TPTPSITSWN NTTAAAAAAS LWENHNHSNS 60 SPCDQEDVSV SVSNHSSLTV DDSSHRLVEP SASSSNNIIG QPTTENNSHL WSQLLLGVGG 120 SQDMHDEMGE NLLKALSLKN FSGGMFEPSA CSDYLKKFDS HQHEKWADTN GDQFRNSNPA 180 TAANSSFTRN FDNTNVGYNG DTNLAENNDD QRSLIKLSSS NLVNSWSIAP PDLSQMTFHH 240 LVPNPCNNNI LPSVDQYLHP DITGDQTKQN LSYQPQLLDM APNSIYDCAS YGVSQTRSGN 300 DHYEESHQVG SSQASLFPKV FINNFESVYG STGGNWRPRE SSIHSQHGFT PSVIDPFNNS 360 RSRSLSKPLL KSLSLLDTRK QQGTNLTNSL INNKSNGRGQ GASANDGKKK RSQEASQSCG 420 SSSRKPKHES NSYNPSTPSS FTKTTTQTPK VKITAEKISA LQQIVSPYGK TDTASVLQEA 480 IGYIKFHQEQ VQLLSNPYLK SNVNKLQTCM MQEAWGSLDR KYEKGEKNKL KVVDLKSKGL 540 CLVPTSSIPQ VYKDNSGPDY WPTYRGCLYR * |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G31050.1 | 5e-36 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0002s0331.1.p |