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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Kalax.0002s0023.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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| Family |
NAC |
| Protein Properties |
Length: 330aa MW: 36577.1 Da PI: 9.3027 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kalax.0002s0023.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 168.9 | 1.7e-52 | 16 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90
lppGfrF Ptdeel+v+yL++kv+g++++l ++i e+d+yk++Pw Lp+k++ +ekewyfFs+rd+ky++g+r+nr++ sgyWkatg+dk
Kalax.0002s0023.1.p 16 LPPGFRFFPTDEELLVHYLCRKVAGHQFSL-QIIGEIDLYKFDPWVLPSKANFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDK 104
79***************************9.89***************99999************************************* PP
NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
+++ +g++vg+kk Lvfy g+apkg+kt+W+mheyrl
Kalax.0002s0023.1.p 105 VITT-EGRKVGIKKALVFYIGKAPKGTKTNWIMHEYRL 141
**99.999****************************97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 330 aa
Download sequence Send
to blast |
MGVEVARTNP LNQLALPPGF RFFPTDEELL VHYLCRKVAG HQFSLQIIGE IDLYKFDPWV 60
LPSKANFGEK EWYFFSPRDR KYPNGSRPNR VAGSGYWKAT GTDKVITTEG RKVGIKKALV 120
FYIGKAPKGT KTNWIMHEYR LFEASRRRTG PKLDDWVLCR IYKKNSSQQK AVQSASVSSK 180
EQSVGSPDAS SPSSHLDDVL DSLPELEPSY VNLRRMNSLK ALLQDDKINL QTLGSGNFDW 240
ATLAGLSTLP EVVAGSQPHS HQAQNLNVYS NEINAPGGYQ SGWGQFMGSF GNQFDEEVQS 300
DIKMGRADGS VAWGQSSGLF GYGSGFGYR*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-103 | 1 | 170 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-103 | 1 | 170 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-103 | 1 | 170 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-103 | 1 | 170 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
| 4dul_A | 1e-103 | 1 | 170 | 4 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 1e-103 | 1 | 170 | 4 | 171 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor that acts downstream of MYC2 in the jasmonate-mediated response to Botrytis cinerea infection (PubMed:28733419). With MYC2 forms a transcription module that regulates wounding-responsive genes (PubMed:28733419). Involved in jasmonate- and coronatine-mediated stomatal reopening in response to Pseudomonas syringae pv tomato DC3000 infection (PubMed:25005917). Regulates the expression of threonine deaminase 2 (TD2) through promoter binding (PubMed:28733419). {ECO:0000269|PubMed:25005917, ECO:0000269|PubMed:28733419}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by jasmonate (JA) (PubMed:25005917, PubMed:28733419, PubMed:30610166). Induced by wounding (PubMed:28733419, PubMed:25005917). Induced by infection with the fungal pathogen Botrytis cinerea (PubMed:28733419). Induced by coronatine (PubMed:25005917). {ECO:0000269|PubMed:25005917, ECO:0000269|PubMed:28733419, ECO:0000269|PubMed:30610166}. |
