PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0850s0001.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | B3 | ||||||||
Protein Properties | Length: 169aa MW: 19025.7 Da PI: 10.141 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 54 | 3.1e-17 | 7 | 90 | 6 | 94 |
..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS B3 6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 +++d ++++ l lp+kf++++g + ++ ++l+ ++ +W+v++ +k+s++++l+kGW +F+++ g++ g f+vF +d + f +v Kaladp0850s0001.1.p 7 ITADITTRSKLKLPRKFVKRYGANVPR--NVRLQVPTRAEWRVEV--KKNSDGVWLGKGWVKFAESLGIRYGHFLVFDYDVVhDVF--HV 90 5789999999***********888555..6***************..*******************************98653555..55 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50863 | 12.435 | 2 | 96 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 1.27E-16 | 3 | 94 | No hit | No description |
SuperFamily | SSF101936 | 3.14E-19 | 3 | 103 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 6.0E-19 | 3 | 96 | IPR015300 | DNA-binding pseudobarrel domain |
SMART | SM01019 | 3.9E-14 | 3 | 96 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 5.2E-14 | 7 | 83 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence Send to blast |
MKFFRIITAD ITTRSKLKLP RKFVKRYGAN VPRNVRLQVP TRAEWRVEVK KNSDGVWLGK 60 GWVKFAESLG IRYGHFLVFD YDVVHDVFHV LALDMSAVEI EYPTVSSIDD NEEEDLSGSR 120 FALKRPKVEH EDGDVVIVNK DGANLGNKRR AAGQAPSGEP ASKKATPSK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49475.1 | 4e-14 | B3 family protein |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0850s0001.1.p |