PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0674s0160.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 291aa    MW: 31787.9 Da    PI: 5.9055
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0674s0160.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.64.5e-112361248
                         HHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding 12 lvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         ++++ ++lG++ W++Ia++++  Rt++++k++w+++l
  Kaladp0674s0160.1.p  2 IIHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 36
                         5788899****.*********.************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129419.96140IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.4E-15137IPR009057Homeodomain-like
SMARTSM007170.002138IPR001005SANT/Myb domain
CDDcd001678.77E-8136No hitNo description
PfamPF002491.0E-9236IPR001005SANT/Myb domain
SuperFamilySSF466891.56E-9241IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MIIHLQALLG NRWAAIASYL PQRTDNDIKN YWNTHLKKKL RKLQSGGGDE NVEGQKCRPK  60
IESSISKGQW ERRLQTDIHT AKQALCEALS IENNPTKFVV PSESSNPVSL SSFSPTTTLL  120
TQTTTASSSS SSGVYASSTE NISKLLQNWM KKTPSAAAKS ESSDQNDRFS FSNNKIQPQK  180
QEGGGPTRSS SSSEGALSAT TTNTSGAFDS IFGVHNSDDE NANLVQDHQS TSLFNDADYK  240
PDMKHGKSPL HQQNEEAPLT LLEKWLFDEV NAPSQGLIDI SSLDDDSVFF *
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007209276.11e-65myb-related protein 306
RefseqXP_021820718.11e-65myb-related protein 306-like
TrEMBLM5WUN22e-64M5WUN2_PRUPE; Uncharacterized protein
STRINGEMJ104754e-65(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47600.12e-39myb domain protein 94