 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Kaladp0606s0021.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
| Family |
MYB_related |
| Protein Properties |
Length: 230aa MW: 26331.3 Da PI: 6.0828 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kaladp0606s0021.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 57.2 | 4e-18 | 169 | 215 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g WT eEd llv++v ++G + W+ Ia+ ++ gR +kqc++rw+++l
Kaladp0606s0021.1.p 169 KGQWTHEEDRLLVQLVDRYGIRKWSIIAQLLP-GRIGKQCRERWHNHL 215
799*****************************.*************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 230 aa
Download sequence Send
to blast |
MDQFGAAKYE EAHPTHQMFV SDTLSKLPTT DGFPFEAVLP LPDNNFLDDN HQPNHQNFNA 60
WASVDKSFDL YQGSYLDPFD TYALESHQTG LSCGMLDRPA NKFYYDYNED IKPLNYVVPD 120
EFSCVTTNVD FTRYSADSNT AQESMIRVTS SVSSARKGPC KGKQSNVIKG QWTHEEDRLL 180
VQLVDRYGIR KWSIIAQLLP GRIGKQCRER WHNHLRPNIK VEFSSIYTF*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1gvd_A | 8e-21 | 167 | 217 | 1 | 51 | MYB PROTO-ONCOGENE PROTEIN |
