PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0210s0002.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 502aa MW: 55998.9 Da PI: 4.7471 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 46.5 | 6.7e-15 | 308 | 350 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + Er RRd++N+++ +L++l+P++ kK + a+i+e A+eYIk+L Kaladp0210s0002.3.p 308 ATERDRRDNLNNKYTTLKSLIPSP-----KKTDRASIVEDAIEYIKEL 350 78**********************.....9****************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 15.383 | 301 | 350 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 4.93E-15 | 303 | 366 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.86E-12 | 303 | 352 | No hit | No description |
SMART | SM00353 | 1.4E-12 | 307 | 356 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.9E-12 | 307 | 350 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.2E-13 | 308 | 375 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 502 aa Download sequence Send to blast |
MYEETACFDP NPIADEGAIQ VISNDLASIP PHGNMESSIA IPHFDFDENV KFPVDEFFYK 60 SSSKEDSMVA PTNVVASSAV GTEFQQQMAY DVENCYYGTE SDSRMQEAIH EVNQALSYEQ 120 SNWVASGDYE VQDMCYSSEN QQQMLQDELV HNGQGIYTSS SVLDVPHPSA PDLLHLLHLP 180 RSPSSASFLP NSTISFVNAS QSSTNFQNGA GLMDAASSSA MFYDPLLHLN LPPQPPIFKD 240 LFQSLPHGFN LPVPMTGSLF ARMDEMERSR GLYHDVDGHL IDDGVLEFTA DMPPQMVKGR 300 NGKLKPFATE RDRRDNLNNK YTTLKSLIPS PKKTDRASIV EDAIEYIKEL TRTINELKVL 360 VEKKRRVKER MKMLKTEASP DPESSSDVKH NSELNEPLRS SWLQRKSKDT EVDVRIIDDE 420 LTVKLSQRKK ANCLLTMSKI LEELQLDLQH VSGGQVGDFY SFVCNTKIGE TSCVYAGGIA 480 KRLIEGVERQ QAGLGTNKIS F* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 362 | 367 | KKRRVK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31210.1 | 5e-54 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0210s0002.3.p |