PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0210s0002.3.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 502aa    MW: 55998.9 Da    PI: 4.7471
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0210s0002.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH46.56.7e-15308350754
                          HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                  HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                          + Er RRd++N+++ +L++l+P++     kK + a+i+e A+eYIk+L
  Kaladp0210s0002.3.p 308 ATERDRRDNLNNKYTTLKSLIPSP-----KKTDRASIVEDAIEYIKEL 350
                          78**********************.....9****************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.383301350IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.93E-15303366IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.86E-12303352No hitNo description
SMARTSM003531.4E-12307356IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.9E-12307350IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-13308375IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 502 aa     Download sequence    Send to blast
MYEETACFDP NPIADEGAIQ VISNDLASIP PHGNMESSIA IPHFDFDENV KFPVDEFFYK  60
SSSKEDSMVA PTNVVASSAV GTEFQQQMAY DVENCYYGTE SDSRMQEAIH EVNQALSYEQ  120
SNWVASGDYE VQDMCYSSEN QQQMLQDELV HNGQGIYTSS SVLDVPHPSA PDLLHLLHLP  180
RSPSSASFLP NSTISFVNAS QSSTNFQNGA GLMDAASSSA MFYDPLLHLN LPPQPPIFKD  240
LFQSLPHGFN LPVPMTGSLF ARMDEMERSR GLYHDVDGHL IDDGVLEFTA DMPPQMVKGR  300
NGKLKPFATE RDRRDNLNNK YTTLKSLIPS PKKTDRASIV EDAIEYIKEL TRTINELKVL  360
VEKKRRVKER MKMLKTEASP DPESSSDVKH NSELNEPLRS SWLQRKSKDT EVDVRIIDDE  420
LTVKLSQRKK ANCLLTMSKI LEELQLDLQH VSGGQVGDFY SFVCNTKIGE TSCVYAGGIA  480
KRLIEGVERQ QAGLGTNKIS F*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1362367KKRRVK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.15e-54bHLH family protein