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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Kaladp0101s0273.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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| Family |
HD-ZIP |
| Protein Properties |
Length: 327aa MW: 36708.6 Da PI: 6.6965 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kaladp0101s0273.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 57.8 | 1.9e-18 | 95 | 147 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+++++ eq+++Le+ Fe+ +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k
Kaladp0101s0273.1.p 95 KRRLNMEQVKTLEKSFEMGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 147
55899***********************************************9 PP
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| 2 | HD-ZIP_I/II | 132.5 | 1.5e-42 | 94 | 185 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
kkrrl+ eqvk+LE+sFe+ +kLeperK +lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy+aLkr++da+k++ne+L++++++L++++
Kaladp0101s0273.1.p 94 KKRRLNMEQVKTLEKSFEMGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDALKRQFDAVKAHNEALQAQNQKLQSQI 183
9***************************************************************************************99 PP
HD-ZIP_I/II 92 ke 93
++
Kaladp0101s0273.1.p 184 SA 185
75 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 327 aa
Download sequence Send
to blast |
MSCNGMAFFP ANFMLQTSQD QEDEDDNHQR HHHHQPPVFP PQDFNGVAAF LGGKRSMPLM 60
QQDHNHACED TKIHNGDQDH ELSDDGSLLA GDPKKRRLNM EQVKTLEKSF EMGNKLEPER 120
KLQLARALGL QPRQIAIWFQ NRRARWKTKQ LEKDYDALKR QFDAVKAHNE ALQAQNQKLQ 180
SQISALMSGG GAAAAVATES FNLNKETIDQ GSCSNRSENS SDHQTNMVKL DMMSRAVTGP 240
ASESSPSQQI PTSMPLFPTS SSTTTTTNSM RPASSSNLSA TQLFFHHHGH HQQHGVKEEN 300
FVSNMFCGIE DQSGFWPWLE QHQNFN*
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| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 141 | 149 | RRARWKTKQ |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor that may act in the sucrose-signaling pathway. {ECO:0000269|PubMed:11292072}. |
| Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Ribone PA,Capella M,Chan RL
Functional characterization of the homeodomain leucine zipper I transcription factor AtHB13 reveals a crucial role in Arabidopsis development.
J. Exp. Bot., 2015. 66(19): p. 5929-43
[PMID:26136262] - Wang X, et al.
Overexpressed BRH1, a RING finger gene, alters rosette leaf shape in Arabidopsis thaliana.
Sci China Life Sci, 2018. 61(1): p. 79-87
[PMID:28887625] - Ebrahimian-Motlagh S, et al.
JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13.
Front Plant Sci, 2017. 8: p. 2118
[PMID:29326734]
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