 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Kaladp0100s0079.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
| Family |
LBD |
| Protein Properties |
Length: 226aa MW: 24599.4 Da PI: 5.151 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kaladp0100s0079.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 115.7 | 3e-36 | 9 | 109 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleq 89
+C aCk+lrrkC+++Cv+apyf ++ + +f +vhk+FGasnv+kll ++p ++r++a+ ++ yeA r+ dPv G+v++i +l+qq+++
Kaladp0100s0079.1.p 9 SCGACKFLRRKCTSECVFAPYFSYDEaATHFGAVHKVFGASNVSKLLMHIPVQHRTEAALTISYEAFSRMTDPVFGCVAHIYALHQQIAN 98
6**********************988689************************************************************* PP
DUF260 90 lkaelallkee 100
l++e++l++++
Kaladp0100s0079.1.p 99 LQEEIELVGSQ 109
******99887 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 226 aa
Download sequence Send
to blast |
MPGQGSSSSC GACKFLRRKC TSECVFAPYF SYDEAATHFG AVHKVFGASN VSKLLMHIPV 60
QHRTEAALTI SYEAFSRMTD PVFGCVAHIY ALHQQIANLQ EEIELVGSQM AAGFPFTFPV 120
SQPTADKVSM NPAAFNLQQQ MDHHQQAQYI TNAGYGNSAA DQSYIYQCQQ LPFVWGSGEA 180
HSGNIDNYLN GEINEGLDHE PLLCSPLLNN NDNVTEIPNT AASGW*
|
