 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Kaladp0099s0120.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 206aa MW: 22526.2 Da PI: 8.9067 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kaladp0099s0120.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 51.8 | 1.4e-16 | 48 | 102 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ +++k+ Lee ++++++++ +++ LAkkl+L rqV vWFqNrRa+ k
Kaladp0099s0120.1.p 48 RKKMRLSKDLSAFLEESYKEHNTLNPKQKLALAKKLHLRPRQVEVWFQNRRARTK 102
5677888999999****************************************98 PP
|
| 2 | HD-ZIP_I/II | 117.7 | 6.5e-38 | 48 | 137 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90
+kk rlsk+ +++LEes++e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+L+r++++l+een rL+ke ++Lr +
Kaladp0099s0120.1.p 48 RKKMRLSKDLSAFLEESYKEHNTLNPKQKLALAKKLHLRPRQVEVWFQNRRARTKLKQTEVDCEYLRRRCETLTEENGRLQKELQDLR-A 136
69*************************************************************************************9.5 PP
HD-ZIP_I/II 91 l 91
l
Kaladp0099s0120.1.p 137 L 137
5 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 206 aa
Download sequence Send
to blast |
MELGLSLGST TANQSSNSNA IVSHSAAEEG DNIGSNRGEE GGQDFGCRKK MRLSKDLSAF 60
LEESYKEHNT LNPKQKLALA KKLHLRPRQV EVWFQNRRAR TKLKQTEVDC EYLRRRCETL 120
TEENGRLQKE LQDLRALKSS NPLLCLQSPA TTLTMCPSCE ATNATTTDTK SSKAVASFPV 180
VTKSGPASCT FPRSNADPDA SSSSR*
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 96 | 104 | RRARTKLKQ |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
