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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Kaladp0098s0053.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 182aa MW: 21480.3 Da PI: 6.9697 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kaladp0098s0053.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 59.3 | 6.3e-19 | 98 | 151 | 4 | 57 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
+ ++++eql++Le+ F+++ +++ e++ +LA++lg++ rq+ vWFqNrRa++k+
Kaladp0098s0053.1.p 98 KKRLNDEQLDALERNFREEIKLDPERKMRLARELGMQPRQIAVWFQNRRARWKN 151
45699***********************************************95 PP
|
| 2 | HD-ZIP_I/II | 112.1 | 3.7e-36 | 97 | 179 | 2 | 84 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekev 84
kk+rl++eq+ +LE++F+ee kL+perK++lareLg+qprq+avWFqnrRAR+k+kqlE+ y+aLk+++d +++e+ rL++ev
Kaladp0098s0053.1.p 97 KKKRLNDEQLDALERNFREEIKLDPERKMRLARELGMQPRQIAVWFQNRRARWKNKQLERMYDALKQEFDVVSREKLRLQEEV 179
9*******************************************************************************997 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 182 aa
Download sequence Send
to blast |
MEPWSNGGSN SIIRPPFLAA RPENNPLNFL YYYNYDDQHQ GCLEQVEAHP GMMMMEPVSP 60
HHVLTSHHSM ENANNPHDDL MMSAKSGHSY GNVQDLKKKR LNDEQLDALE RNFREEIKLD 120
PERKMRLARE LGMQPRQIAV WFQNRRARWK NKQLERMYDA LKQEFDVVSR EKLRLQEEVT 180
F*
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 144 | 152 | RRARWKNKQ |
