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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Kaladp0095s0706.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family |
TALE |
Protein Properties |
Length: 440aa MW: 48963.9 Da PI: 6.7627 |
Description |
TALE family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Kaladp0095s0706.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 28.4 | 2.8e-09 | 367 | 404 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54
Fe ++yp+++e+ L++++gL+++qV++WF N R +
Kaladp0095s0706.1.p 367 FEHflHPYPTESEKLILSSQTGLSKNQVSNWFINARVR 404
554459******************************88 PP
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2 | BELL | 101.7 | 5.6e-33 | 229 | 300 | 1 | 72 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72
e+qel+ k akL+slleeV+ rY++y++q+q v+ssFe +ag gsa+ Yt lAl+a+S+hF +L dai +qi
Kaladp0095s0706.1.p 229 EKQELHLKFAKLVSLLEEVESRYERYCHQMQEVVSSFELIAGAGSARCYTGLALQAMSKHFFSLSDAILSQI 300
689*******************************************************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 440 aa
Download sequence Send
to blast |
MVSQNTPSSS GILHHFIASD PNPSQTQLNQ RLDAYISAMR CNDAFPQPPP AGLPSIQSLG 60 ERMSRSIDLV RPPTMAEDSE ISHTRHLVDL LGTNTPETGH PAQRLSLSLG SQMLLSQSQY 120 RQRSYNHDLV SPHYSISSEE GREGGYSPGA AGQASDHFAY SPSSLVNTVR GSKYLKAVQS 180 LLQEVVNTSD YEAGWDDYGK KLSVRGRRAA RLSSELSTEM CSNGFLSDEK QELHLKFAKL 240 VSLLEEVESR YERYCHQMQE VVSSFELIAG AGSARCYTGL ALQAMSKHFF SLSDAILSQI 300 HLTKKKMYQD SPRLSSGASQ LTLFDQEGKH NRLTLQQIGL LHGQRQAWRP IRGLPETSVV 360 ILRAWLFEHF LHPYPTESEK LILSSQTGLS KNQVSNWFIN ARVRLWKPMI EEMYKEEFAD 420 SDSDPLGTSG GGGTLHFEE*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
3k2a_A | 7e-16 | 354 | 412 | 5 | 63 | Homeobox protein Meis2 |
3k2a_B | 7e-16 | 354 | 412 | 5 | 63 | Homeobox protein Meis2 |
4xrm_A | 6e-16 | 354 | 412 | 5 | 63 | Homeobox protein Meis2 |
4xrm_B | 6e-16 | 354 | 412 | 5 | 63 | Homeobox protein Meis2 |
4xrs_A | 5e-16 | 354 | 411 | 1 | 58 | Homeobox protein Meis1 |
4xrs_B | 5e-16 | 354 | 411 | 1 | 58 | Homeobox protein Meis1 |
5bng_A | 6e-16 | 354 | 412 | 1 | 59 | Homeobox protein Meis2 |
5bng_B | 6e-16 | 354 | 412 | 1 | 59 | Homeobox protein Meis2 |
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