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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Kaladp0095s0627.2.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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| Family |
TALE |
| Protein Properties |
Length: 374aa MW: 41829.1 Da PI: 5.1181 |
| Description |
TALE family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kaladp0095s0627.2.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 24.2 | 5.7e-08 | 319 | 351 | 23 | 55 |
SS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
Homeobox 23 rypsaeereeLAkklgLterqVkvWFqNrRake 55
+yp++ ++ LA+ +gL+++q+ +WF N+R ++
Kaladp0095s0627.2.p 319 PYPTEVDKIALAECTGLDQKQINNWFINQRKRH 351
8*****************************885 PP
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| 2 | ELK | 37.1 | 6.9e-13 | 271 | 292 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22
ELK+ LlrKYsgy+++Lk+EFs
Kaladp0095s0627.2.p 271 ELKDKLLRKYSGYISTLKHEFS 292
9********************8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 374 aa
Download sequence Send
to blast |
MLFTCRRLQI YTYTLVYRFL LSSSKTTMDE MYGCLHYATL DLASSTPPPP PLPLPLPSLS 60
HHHNPLLLSP LPPPPNSSLI SPDDDFAFRD HYHQPMFGSD HPSSFFSMSS AMSDAASAVA 120
AEIQDGDFSS ALRARIAAHP LYPRLVEAYI DCQKVGAPPD VAYVLDEIRR ENDLSGAASV 180
TTCFGADPEL DEFMESYCDI LAKYRSDLAK PFHEATSYLN SMEAQLSSLC NYNGASLGHV 240
SDDAAGSSEE ELSGGESADI MGFLPNSEDQ ELKDKLLRKY SGYISTLKHE FSKKKKKGKL 300
PKDAKQVLLG WWNDHYKWPY PTEVDKIALA ECTGLDQKQI NNWFINQRKR HWKPSENMQF 360
AVMDTDSLLY TNE*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Plays a role in meristem function. Contributes to the shoot apical meristem (SAM) maintenance and organ separation by controlling boundary establishment in embryo in a CUC1, CUC2 and STM-dependent manner. Involved in maintaining cells in an undifferentiated, meristematic state. Probably binds to the DNA sequence 5'-TGAC-3'. {ECO:0000269|PubMed:16798887}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Seems to be repressed by AS2 and AS1 but induced by STM, CUC1 and CUC2. {ECO:0000269|PubMed:11311158, ECO:0000269|PubMed:16798887}. |
