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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Kaladp0095s0321.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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| Family |
NAC |
| Protein Properties |
Length: 348aa MW: 38469.1 Da PI: 7.879 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kaladp0095s0321.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 172.1 | 1.7e-53 | 15 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90
lppGfrFhPtdeelvv+yLkkk+++ +l++ ++i+e+d+yk++Pw+Lp k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk
Kaladp0095s0321.1.p 15 LPPGFRFHPTDEELVVHYLKKKIASLPLPV-SIIAEIDLYKFDPWELPGKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDK 103
79****************************.89***************8888999*********************************** PP
NAM 91 evlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
++l++ ++++vg+kk Lvfy g+ pkg kt+W+mheyrl
Kaladp0095s0321.1.p 104 PILTSnGTHKVGVKKALVFYGGKPPKGIKTNWIMHEYRL 142
**99867788***************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 348 aa
Download sequence Send
to blast |
MESTDSSTCS QHPQLPPGFR FHPTDEELVV HYLKKKIASL PLPVSIIAEI DLYKFDPWEL 60
PGKATFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG TDKPILTSNG THKVGVKKAL 120
VFYGGKPPKG IKTNWIMHEY RLVDGSVSSN AFKPPVADAS STNKKASLRL DDWVLCRIYK 180
KSNGSRPMDT DPGHDKDDSS MDEMLISSSS RQNYTGLLEP PDESHFFDGI LPHQHPAMAQ 240
QPASMLTHLN PKQPTLSMVL PAQEHKRPHP NLVHEFWMGA ASEFKKMNSE GEERETGAGS 300
GSGSFVSLLS PHAGGGGYHQ NFMLGSISGG DGYSRPGYHQ QLNWNNS*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 2e-72 | 15 | 186 | 17 | 170 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 2e-72 | 15 | 186 | 17 | 170 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 2e-72 | 15 | 186 | 17 | 170 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 2e-72 | 15 | 186 | 17 | 170 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 2e-72 | 15 | 186 | 20 | 173 | NAC domain-containing protein 19 |
| 3swm_B | 2e-72 | 15 | 186 | 20 | 173 | NAC domain-containing protein 19 |
| 3swm_C | 2e-72 | 15 | 186 | 20 | 173 | NAC domain-containing protein 19 |
| 3swm_D | 2e-72 | 15 | 186 | 20 | 173 | NAC domain-containing protein 19 |
| 3swp_A | 2e-72 | 15 | 186 | 20 | 173 | NAC domain-containing protein 19 |
| 3swp_B | 2e-72 | 15 | 186 | 20 | 173 | NAC domain-containing protein 19 |
| 3swp_C | 2e-72 | 15 | 186 | 20 | 173 | NAC domain-containing protein 19 |
| 3swp_D | 2e-72 | 15 | 186 | 20 | 173 | NAC domain-containing protein 19 |
| 4dul_A | 2e-72 | 15 | 186 | 17 | 170 | NAC domain-containing protein 19 |
| 4dul_B | 2e-72 | 15 | 186 | 17 | 170 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene coding for a functional protein (NAM-A1) and one extra pseudogene (NAM-B1) (PubMed:17124321). Plays a weaker role in terminal senescence than NAM-A1. {ECO:0000269|PubMed:17124321, ECO:0000269|PubMed:22278768}. |
| UniProt | Transcription factor of the NAC family. May be associated with anther development and pollen production (Probable). Required for normal seed development and morphology (PubMed:18849494). {ECO:0000269|PubMed:18849494, ECO:0000305|PubMed:21107887}. |
