PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0095s0211.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Dof
Protein Properties Length: 439aa    MW: 47218.4 Da    PI: 6.8431
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0095s0211.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1131.3e-35100158260
               zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 
                          ++k+++cprC s++tkfCy+nny  +qPryfC++C+ryWt GG++rn+PvG+grrk+k 
  Kaladp0095s0211.1.p 100 PDKIIPCPRCASMDTKFCYFNNYKANQPRYFCRKCQRYWTSGGTMRNLPVGAGRRKSKC 158
                          7899****************************************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074785.0E-2793157IPR003851Zinc finger, Dof-type
PfamPF027011.8E-29102157IPR003851Zinc finger, Dof-type
PROSITE profilePS5088426.795104158IPR003851Zinc finger, Dof-type
PROSITE patternPS013610106142IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 439 aa     Download sequence    Send to blast
MDDEDQIPEP LSDAPTKLFG PSIAEPSPPP RPSGSEGACD ADVEEGRGCG MESGLDDESD  60
DEGEEENGDL QKTDQQDAAA GTNDGQKSEA GAQEKTLKKP DKIIPCPRCA SMDTKFCYFN  120
NYKANQPRYF CRKCQRYWTS GGTMRNLPVG AGRRKSKCSA PQRQQMEVPR DFQTVSTRGS  180
NGVVAHNGSV PQVSSPKGVE KASRLNGLGK PKELKISSSH ETVVDGSRSG SAGSGSNIEN  240
EGQATARAAR GYQSFQPHML CFPAPLWPPF PWNPAQYNCP LPSPIIYPPG FPVPFYPCVP  300
RAWNVPLSAH PSSPSLQSES KSPTLGKHSR DNIDNAAKPG NTQAGERPKE GNPKPSIWVP  360
KTVRMDDLEE AAKSSMWATL GIKYDNILQS NGKGHLNPFS SLAVETERSR PVSSTSSALL  420
ANPAALSRSM NFHESSST*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6PA573e-96A0A2R6PA57_ACTCH; Cyclic dof factor like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39660.22e-35cycling DOF factor 2