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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Kaladp0091s0012.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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| Family |
NAC |
| Protein Properties |
Length: 339aa MW: 38105.3 Da PI: 5.3627 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kaladp0091s0012.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 172.2 | 1.6e-53 | 6 | 134 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88
lppGfrFhPtdeel+++yLk+kveg k+el evi+ +d+yk++Pw+Lp+ + + + ew+fF++rd+ky++g+r+nrat++gyWkatgk
Kaladp0091s0012.1.p 6 LPPGFRFHPTDEELIDYYLKRKVEGLKIEL-EVIPVIDLYKYDPWELPElsFLPNMDMEWFFFCPRDRKYPHGSRTNRATRAGYWKATGK 94
79****************************.99**************94345556788******************************** PP
NAM 89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
d+++++++++lvg +ktLvfy+grap+g + dWvmheyrl
Kaladp0091s0012.1.p 95 DRRIVCQSSSLVGYRKTLVFYRGRAPQGDRMDWVMHEYRL 134
**************************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0008283 | Biological Process | cell proliferation |
| GO:0071365 | Biological Process | cellular response to auxin stimulus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 339 aa
Download sequence Send
to blast |
MSGGSLPPGF RFHPTDEELI DYYLKRKVEG LKIELEVIPV IDLYKYDPWE LPELSFLPNM 60
DMEWFFFCPR DRKYPHGSRT NRATRAGYWK ATGKDRRIVC QSSSLVGYRK TLVFYRGRAP 120
QGDRMDWVMH EYRLSDDLPD TSGMPNAPGA FALCRVLKRS DKTYGSKNTV SGSRSRSMSS 180
AIVSNEPSHL STEESQPQTN YGSNGSNYST PNASPYSIAA PLAESVEPHH PNPSHFWVSP 240
DLILDSSSEH QQEGALWQHY PQNEDIVAPM TMWQPYGDIS PCTSFSNLNE GTSATGGVCG 300
TATNMSPPHP ENADYMSFWG NDDITFEDYS LLNNHNLF*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 6e-48 | 5 | 160 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 6e-48 | 5 | 160 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 6e-48 | 5 | 160 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 6e-48 | 5 | 160 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 8e-48 | 5 | 160 | 19 | 169 | NAC domain-containing protein 19 |
| 3swm_B | 8e-48 | 5 | 160 | 19 | 169 | NAC domain-containing protein 19 |
| 3swm_C | 8e-48 | 5 | 160 | 19 | 169 | NAC domain-containing protein 19 |
| 3swm_D | 8e-48 | 5 | 160 | 19 | 169 | NAC domain-containing protein 19 |
| 3swp_A | 8e-48 | 5 | 160 | 19 | 169 | NAC domain-containing protein 19 |
| 3swp_B | 8e-48 | 5 | 160 | 19 | 169 | NAC domain-containing protein 19 |
| 3swp_C | 8e-48 | 5 | 160 | 19 | 169 | NAC domain-containing protein 19 |
| 3swp_D | 8e-48 | 5 | 160 | 19 | 169 | NAC domain-containing protein 19 |
| 4dul_A | 6e-48 | 5 | 160 | 16 | 166 | NAC domain-containing protein 19 |
| 4dul_B | 6e-48 | 5 | 160 | 16 | 166 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor involved in tissue reunion of wounded inflorescence stems. Required for the division of pith cells in the reunion process, which is dependent on polar-transported auxin and the wound-inducible hormones ethylene and jasmonate (PubMed:21911380). Binds to the promoters of XTH19 and XTH20 to induce their expression via auxin signaling. XTH19 and XTH20 are involved in cell proliferation in the tissue reunion process of incised stems (PubMed:25182467). Involved in hypocotyl graft union formation. Required for the auxin- mediated promotion of vascular tissue proliferation during hypocotyl graft attachment (PubMed:27986917). {ECO:0000269|PubMed:21911380, ECO:0000269|PubMed:25182467, ECO:0000269|PubMed:27986917}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by wounding in the flowering stem. {ECO:0000269|PubMed:21911380}. |
