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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Kaladp0089s0017.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
| Family |
NAC |
| Protein Properties |
Length: 216aa MW: 24431.6 Da PI: 6.7823 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kaladp0089s0017.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 83.2 | 5.3e-26 | 13 | 146 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyW 83
lppG+rF Pt+++l+ +yL+ k + ++ ++ ++i e+d++ ++P +L + + +++++wy +s+r ++++ +r +r t+ gyW
Kaladp0089s0017.1.p 13 LPPGCRFFPTEQQLLRHYLRGKNSVSDdHSNVNMIGEFDVLGHDPFELVEigcfeyGIGGRRRHWYCYSPRVERKR--TRMRR-TRGGYW 99
79******************99777663344477**************7456776555557779999999988765..46666.789*** PP
NAM 84 katgkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128
k +gk ++v+ ++g ++g ++ vf g a++g tdWv+ ey+l
Kaladp0089s0017.1.p 100 KRKGKVRDVVGEGGVVTGKRTEYVFMLGefGAKSGLLTDWVVYEYAL 146
**************************65348999***********87 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 216 aa
Download sequence Send
to blast |
MADPKNPAQR APLPPGCRFF PTEQQLLRHY LRGKNSVSDD HSNVNMIGEF DVLGHDPFEL 60
VEIGCFEYGI GGRRRHWYCY SPRVERKRTR MRRTRGGYWK RKGKVRDVVG EGGVVTGKRT 120
EYVFMLGEFG AKSGLLTDWV VYEYALIEED KDFVLCRAFE KSRQREDASH AANFGVSGDS 180
CLHDSSDLAS IMEQGDFIEL DDLLKPLPSM DNAGS*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 2e-18 | 6 | 161 | 10 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 2e-18 | 6 | 161 | 10 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 2e-18 | 6 | 161 | 10 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 2e-18 | 6 | 161 | 10 | 165 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 2e-18 | 6 | 161 | 13 | 168 | NAC domain-containing protein 19 |
| 3swm_B | 2e-18 | 6 | 161 | 13 | 168 | NAC domain-containing protein 19 |
| 3swm_C | 2e-18 | 6 | 161 | 13 | 168 | NAC domain-containing protein 19 |
| 3swm_D | 2e-18 | 6 | 161 | 13 | 168 | NAC domain-containing protein 19 |
| 3swp_A | 2e-18 | 6 | 161 | 13 | 168 | NAC domain-containing protein 19 |
| 3swp_B | 2e-18 | 6 | 161 | 13 | 168 | NAC domain-containing protein 19 |
| 3swp_C | 2e-18 | 6 | 161 | 13 | 168 | NAC domain-containing protein 19 |
| 3swp_D | 2e-18 | 6 | 161 | 13 | 168 | NAC domain-containing protein 19 |
| 4dul_A | 2e-18 | 6 | 161 | 10 | 165 | NAC domain-containing protein 19 |
| 4dul_B | 2e-18 | 6 | 161 | 10 | 165 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 85 | 101 | RKRTRMRRTRGGYWKRK |
