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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Kaladp0072s0040.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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| Family |
NAC |
| Protein Properties |
Length: 235aa MW: 26196.3 Da PI: 8.1465 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kaladp0072s0040.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 97.4 | 2.2e-30 | 12 | 88 | 54 | 129 |
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129
+ +ewyfFs rd+kyatg r+nrat sgyWkatgkd+++l+ ++ + g++ktLvfyk+rap+g kt W+mhe+rle
Kaladp0072s0040.1.p 12 NATEWYFFSFRDRKYATGFRTNRATMSGYWKATGKDRTILDPsDRCVAGMRKTLVFYKNRAPNGIKTGWIMHEFRLE 88
567**************************************9666779**************************985 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 235 aa
Download sequence Send
to blast |
MCKNNAEVGK LNATEWYFFS FRDRKYATGF RTNRATMSGY WKATGKDRTI LDPSDRCVAG 60
MRKTLVFYKN RAPNGIKTGW IMHEFRLETP HFPPKEDWVL CRVFHKAKIS ASSNHGCCEP 120
HAAMLPCVIS QNQISSLSST QNGNMVSNHK ALLNNHNNHY GAVFKFGAQE EKNPATAASS 180
VTEMNSVDDG RGEGRGSYDF LWGINLEEIN SLAPSDEGGT LQDHQMDANS LSFF*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 8e-27 | 15 | 106 | 72 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 8e-27 | 15 | 106 | 72 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 8e-27 | 15 | 106 | 72 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 8e-27 | 15 | 106 | 72 | 165 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 9e-27 | 15 | 106 | 75 | 168 | NAC domain-containing protein 19 |
| 3swm_B | 9e-27 | 15 | 106 | 75 | 168 | NAC domain-containing protein 19 |
| 3swm_C | 9e-27 | 15 | 106 | 75 | 168 | NAC domain-containing protein 19 |
| 3swm_D | 9e-27 | 15 | 106 | 75 | 168 | NAC domain-containing protein 19 |
| 3swp_A | 9e-27 | 15 | 106 | 75 | 168 | NAC domain-containing protein 19 |
| 3swp_B | 9e-27 | 15 | 106 | 75 | 168 | NAC domain-containing protein 19 |
| 3swp_C | 9e-27 | 15 | 106 | 75 | 168 | NAC domain-containing protein 19 |
| 3swp_D | 9e-27 | 15 | 106 | 75 | 168 | NAC domain-containing protein 19 |
| 4dul_A | 8e-27 | 15 | 106 | 72 | 165 | NAC domain-containing protein 19 |
| 4dul_B | 8e-27 | 15 | 106 | 72 | 165 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional activator that mediates auxin signaling to promote lateral root development. Activates the expression of two downstream auxin-responsive genes, DBP and AIR3. {ECO:0000269|PubMed:11114891}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by auxin. |
| Publications
? help Back to Top |
- Le Hénanff G, et al.
Grapevine NAC1 transcription factor as a convergent node in developmental processes, abiotic stresses, and necrotrophic/biotrophic pathogen tolerance.
J. Exp. Bot., 2013. 64(16): p. 4877-93
[PMID:24043850] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Xiao D, et al.
SENESCENCE-SUPPRESSED PROTEIN PHOSPHATASE Directly Interacts with the Cytoplasmic Domain of SENESCENCE-ASSOCIATED RECEPTOR-LIKE KINASE and Negatively Regulates Leaf Senescence in Arabidopsis.
Plant Physiol., 2015. 169(2): p. 1275-91
[PMID:26304848] - Huo X,Wang C,Teng Y,Liu X
Identification of miRNAs associated with dark-induced senescence in Arabidopsis.
BMC Plant Biol., 2015. 15: p. 266
[PMID:26530097] - Chen X, et al.
Auxin-Independent NAC Pathway Acts in Response to Explant-Specific Wounding and Promotes Root Tip Emergence during de Novo Root Organogenesis in Arabidopsis.
Plant Physiol., 2016. 170(4): p. 2136-45
[PMID:26850273] - Liu C,Wang B,Li Z,Peng Z,Zhang J
TsNAC1 Is a Key Transcription Factor in Abiotic Stress Resistance and Growth.
Plant Physiol., 2018. 176(1): p. 742-756
[PMID:29122985]
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