PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0071s0068.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NAC
Protein Properties Length: 401aa    MW: 45498.3 Da    PI: 4.3883
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0071s0068.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM57.73.9e-1891426128
                  NAM   6 rFhPtdeelvveyLkkk.vegkk..leleevikev.diykv.ePwdL.pkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                           F+P+d++l++++L++k veg++   +  + i+e+ diy    Pw++ p     + +e y F+k  k +  g+r nr+++ g+Wk + +d
  Kaladp0071s0068.1.p   9 GFKPSDKQLLDYFLRRKqVEGRElhRDSLSLIPEIdDIYGQrPPWEIfP-----DLREHYAFTKLVKLSDGGSRVNRKVNGGFWKLQKND 93 
                          6*************99956666654334456****889976478**933.....56899**************************98776 PP

                  NAM  90 kevlsk..........kgelvglkktLvfykgrapkgektdWvmheyrl 128
                              +           +++  g kk+L f + + + ++ ++W m ey+l
  Kaladp0071s0068.1.p  94 DVFDVDetsggderviRSKWFGKKKMLSFMSREGKMAKTSHWNMSEYTL 142
                          55444355665554444444**********9999999999*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100525.254158IPR003441NAC domain
SuperFamilySSF1019415.1E-208157IPR003441NAC domain
PfamPF023651.4E-119142IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    Send to blast
MEDDASSLGF KPSDKQLLDY FLRRKQVEGR ELHRDSLSLI PEIDDIYGQR PPWEIFPDLR  60
EHYAFTKLVK LSDGGSRVNR KVNGGFWKLQ KNDDVFDVDE TSGGDERVIR SKWFGKKKML  120
SFMSREGKMA KTSHWNMSEY TLPEWKHGDW VLCHVRFNHK AAAREEEKAA KDAVRMKGNV  180
EEQEAAASNN TFMKEQEDYV HAAPSLEWTC QDPNQLQPRR HSAQQQDLEV RAAGNVATVN  240
ENEFMQGVDS WEAPDHDFFL GLTPVDCIPP TQDCGLSENQ ERDAITDSVA EVALMQNNVD  300
PWNPNDIFLL GDLDANQEEL QQGVDSWEPP DNDFFLDSAP VDCVPSPPQE CGSFKNQKQD  360
ATTGGSMAQQ FVQKVDSWVP SDTFIRDLDA WAADEFAKMG *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10480.21e-12NAC domain containing protein 50