PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0068s0042.2.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 204aa    MW: 23049.1 Da    PI: 10.9073
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0068s0042.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP233.79.2e-11107145348
                  AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48 
                           +GV++  k+ +W A I++      +k+++lg+ gt eeAa ++++
  Kaladp0068s0042.2.p 107 MRGVYF--KNMKWQAAIKVE-----KKQIHLGTVGTQEEAAHLYDR 145
                          79**98..47*********6.....6******************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.9E-4106145IPR001471AP2/ERF domain
SuperFamilySSF541711.77E-6107147IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.108.2E-5109146IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    Send to blast
MVSVRKAWRK LMGLSPGPST MVGPQLVLPK NGGMPPKHLR STNPVSVYPM PPSEFEQPTP  60
SNNDGVGSSY VSASSSPIEQ RDQPISGVKR RKPHKRKVAH DRQPCLMRGV YFKNMKWQAA  120
IKVEKKQIHL GTVGTQEEAA HLYDRXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX  180
XXXXXXXXXX XXXXXXXXXX XXX*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022758728.16e-41ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_022758729.16e-41ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_022758731.16e-41ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_022758732.16e-41ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_022758733.16e-41ethylene-responsive transcription factor-like protein At4g13040
TrEMBLA0A3S3QLM12e-34A0A3S3QLM1_9MAGN; Ethylene-responsive transcription factor-like protein isoform X2
STRINGPGSC0003DMT4000450912e-33(Solanum tuberosum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.21e-23ERF family protein