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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Kaladp0067s0047.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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| Family |
HD-ZIP |
| Protein Properties |
Length: 180aa MW: 20220.7 Da PI: 7.0304 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kaladp0067s0047.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 56.4 | 5.1e-18 | 18 | 71 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+++++t++q++ Le+ F n++++++ + +L+++l+L+ rq+ vW+qN+Ra++k
Kaladp0067s0047.1.p 18 SKRRLTEDQIRLLETNFSFNKKLDQDLKYHLSQQLNLPPRQIAVWYQNKRARWK 71
56789************************************************9 PP
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| 2 | HD-ZIP_I/II | 100.7 | 1.3e-32 | 19 | 109 | 3 | 93 |
HD-ZIP_I/II 3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
krrl+++q++lLE++F+ ++kL+++ K +l+++L+l prq+avW+qn+RAR+kt+ +E+d++a+++++ +++++n++Le+eve+L+eel+
Kaladp0067s0047.1.p 19 KRRLTEDQIRLLETNFSFNKKLDQDLKYHLSQQLNLPPRQIAVWYQNKRARWKTQAMESDHKAMQSKLASVMSHNRKLEREVEKLQEELD 108
9**************************************************************************************997 PP
HD-ZIP_I/II 93 e 93
+
Kaladp0067s0047.1.p 109 Q 109
6 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009637 | Biological Process | response to blue light |
| GO:0009646 | Biological Process | response to absence of light |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 180 aa
Download sequence Send
to blast |
MDFLKWQDTE KPDSGKGSKR RLTEDQIRLL ETNFSFNKKL DQDLKYHLSQ QLNLPPRQIA 60
VWYQNKRARW KTQAMESDHK AMQSKLASVM SHNRKLEREV EKLQEELDQA RAMVHASSTS 120
VPAYSCAVST SGEDDGGSSF VDRSECCLDN ELYACVAGVE SRHQFLSVAG GFGAFGPSI*
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