PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0058s0255.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 227aa    MW: 25682.2 Da    PI: 10.6118
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0058s0255.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.71.1e-11105146351
                  AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                           +GV++  k+ +W A I++      +k+++lg+ gt eeAa ++++a+ 
  Kaladp0058s0255.1.p 105 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGTQEEAAHLYDRAAF 146
                          79**98..47*********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003802.1E-4104161IPR001471AP2/ERF domain
PfamPF008476.9E-6104147IPR001471AP2/ERF domain
SuperFamilySSF541714.05E-8105149IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.108.0E-7107151IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    Send to blast
MVSVRKAWRK LMGLSPGQSS FGGPLAETSS KGNKTDLPPL VSKPISMRTI LPGVEQTTKD  60
DFKPISNHFS GSSTTKEQPG RPISEFKRRK RHRRKQIQDQ ETCLMRGVYF KNMKWQAAIK  120
VDKKQIHLGT VGTQEEAAHL YDRAAFMCGR EPNFELSEEE KQELKRLNWD EFLTMTRSTI  180
TNKKHQRRRL VTSRLRSVLS SQLCSDTDVG QGVQSSTPSD EKGLDT*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022758728.11e-72ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_022758729.11e-72ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_022758731.11e-72ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_022758732.11e-72ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_022758733.11e-72ethylene-responsive transcription factor-like protein At4g13040
TrEMBLA0A067FF443e-66A0A067FF44_CITSI; Uncharacterized protein
TrEMBLA0A2H5NJ063e-66A0A2H5NJ06_CITUN; Uncharacterized protein
TrEMBLV4T9413e-66V4T941_9ROSI; Uncharacterized protein
STRINGXP_006443556.14e-67(Citrus clementina)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.16e-47ERF family protein